| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3113 |
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| Symbol | |
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| ID | 4075560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 84619 |
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| End bp | 85536 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638004615 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_611349 |
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| Protein GI | 99078091 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.31067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAGAT TCATACTAAA GCGCCTGGCT CTTGGCCTTT CGGTCGCGCT GACCGTGTCG
CTTGCGACCT TCCTGATGCT GAACCTGGCA GCCGACCCTG CGGCTATGGT TGCCGGTGAA
GACGCCACCC AAGAAGCTAT CGAGCAAATC CGCGTGCAAT ACGGGTTTGA CCGTCCGCTT
TACGTCCGCT TTTTCGAATG GTTTGGTAGC ATTCTCGTTG GTGACTTTGG TGACAGCTAT
TACTGGAAAA AACCGGTATT CGATCTGCTG ATCGAACGCG CACCGGTTAC CATAACCCTC
GCCCTTGGCG CGCTCAGCGT CACTGTTCTG GTAGGTCTTC CGCTGGGTGT TCTGGCCGCG
CTGAAACCAA ATGGCTGGCT TGATCGCTTT GCCTTGAGTT TCGGCACCGC CGCTCAGGCC
GTTCCGAATT TCTGGCTCGG GCTGATCCTG ATCATCCTTT TGGGCGTTAT GTTTCCGATC
TTTCCTGTTT CGGGAGATTC CACCTGGAAA CACTTCATCC TGCCCTGTTT CGTTCTTGGC
ACCAGCGCGG TTCCCCAGGT GTTGCGCCTC ACACGGACCG GCATGATCGA GGTGCTGGGC
TCTGACTATA TTCGCACTGC CCGTGCCAAA GGGTTTCGTT CAAGCCAGAT CTTGTTCCGC
CATGCGCTGC GCAACGCGCT TTTGCCGGTT GTGAGCGTTC TGGCGATCCA ATTGGGCTAC
AAGCTGGGTG GCTCGGTCAT CACCGAAACG ATCTTTGCGC TCAATGGCCT GGGCCGGCTG
GCCTACGAGT CGATCCTCGG CGCCGACATC CCGACGGTGC AAATGCTCGT CTTCTTCTTT
GCCCTCGTCT TCATCGTCCT GACCGTTCTG GGCGACATCC TGAACGCGTG GCTTGATCCT
CGCATGCGTG TGGAGTGA
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| Protein sequence | MLRFILKRLA LGLSVALTVS LATFLMLNLA ADPAAMVAGE DATQEAIEQI RVQYGFDRPL
YVRFFEWFGS ILVGDFGDSY YWKKPVFDLL IERAPVTITL ALGALSVTVL VGLPLGVLAA
LKPNGWLDRF ALSFGTAAQA VPNFWLGLIL IILLGVMFPI FPVSGDSTWK HFILPCFVLG
TSAVPQVLRL TRTGMIEVLG SDYIRTARAK GFRSSQILFR HALRNALLPV VSVLAIQLGY
KLGGSVITET IFALNGLGRL AYESILGADI PTVQMLVFFF ALVFIVLTVL GDILNAWLDP
RMRVE
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