| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3111 |
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| Symbol | |
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| ID | 4075558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 82004 |
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| End bp | 82963 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638004613 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_611347 |
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| Protein GI | 99078089 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAGTA TCATTAATAT GCACCAGAAG AATTTGAATG CCATCGATTT GAATCTCCTA
AAGGTTTTTT CGGCTCTCGC GGCCGAACGA AGCGTAACCA AAGCCGCGAA CTCTGTCGGA
TTAAGCCAAC CCGCGGTCAG CCATGCGTTG CGGCGGTTGC GCGACCTGAT GGATGATGAG
TTGTTCATTC GATCGACCGA CGGCATGCAA CCGACCGAGC GCTGCCGTGA GCTGGCACCG
GCCATAGACG CCAGCCTAAA GATGCTTCAG GACGCTATGA CGGTGAAGGA TGACAATGAT
CCGGCCAACC TGCGTGCAAC TTATCGCTTG GGCATGAATG ATCTGTTTTC AACGCTGCTT
GTGCCTGGCC TCACTGCACG TGTTGCGAAA CAGGCACCGA ATGTTTCTTT GCGGTTTTTG
CACTCGATGG CGATCAACCA GAACGTCGAT GACGCCTACT CAGATTTGGA ACGCGGAAGG
ATCGATCTCA CGGTCATTCA GGATTTTGAT ACACCTTCGC GTTTTGATCG CGAACTTCTG
GGTGCAAGTG AGTTTGTTTG CGTCGCTCGT GCAGGGCACC CGGTGTTTCA ACCGGGTTTG
AGCATGGAGC AATACACGTC GCTTGGTCAC ATCATGTTCA CCACGCTGGA CGCCGAATAC
AGCCGTATCG ACGAAGCACT TTCAAAGATG GGGATTCGGC GGCGGATCGA ACTTCGTGTG
CCGCATTATT CCGCAGCACT CAGCGCAACG GCTCTGACCG ATCTGGTCTA CACCGTGCCG
CGCATACTGG CTCAGCACGC CGAACAGGCT TTCGGACTGC AGGTATCGGA ACTGCCCTTT
GAAGCTCCGG TCAGGAAGAT TTTTCAGGTT TGGCACAAAA CCCGCACCAA GGACTTTGGA
CATCAATGGC TGCGAAACGT CGTTTCCGAC GTTTCGCAGC TCTCAGGAAT TGTGCCTTGA
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| Protein sequence | MISIINMHQK NLNAIDLNLL KVFSALAAER SVTKAANSVG LSQPAVSHAL RRLRDLMDDE
LFIRSTDGMQ PTERCRELAP AIDASLKMLQ DAMTVKDDND PANLRATYRL GMNDLFSTLL
VPGLTARVAK QAPNVSLRFL HSMAINQNVD DAYSDLERGR IDLTVIQDFD TPSRFDRELL
GASEFVCVAR AGHPVFQPGL SMEQYTSLGH IMFTTLDAEY SRIDEALSKM GIRRRIELRV
PHYSAALSAT ALTDLVYTVP RILAQHAEQA FGLQVSELPF EAPVRKIFQV WHKTRTKDFG
HQWLRNVVSD VSQLSGIVP
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