Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3107 |
Symbol | |
ID | 4075554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 78144 |
End bp | 78464 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638004609 |
Product | histone-like nucleoid-structuring protein H-NS |
Protein accession | YP_611343 |
Protein GI | 99078085 |
COG category | [R] General function prediction only |
COG ID | [COG2916] DNA-binding protein H-NS |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCATCG ACCTGAACAA AATGTCCCGA AAGGACCTGC TTCAGTTGCG CAAAGACGTT GAAAAGGCAC TGAAAGATGC TGAACTGCGC GAACGCACCG AGGCTCTGAA AGCCGCCGAA CAGGCTGCCG CTGAATATGG CTTCTCTCTC GACGAAGTCC TCTCTGGCCC GGCAAAGGGT GCTGCGCGGA AATCAAAAGC CAGCCCGAAA TACCGTAATC CCGAAAATCC GGACGAAACG TGGACAGGCC GTGGCCGCAA ACCGCATTGG GTCCATACTG CCCTGAGCAA TGGTGTCGAT ATATCCGATC TGGAAATTTG A
|
Protein sequence | MSIDLNKMSR KDLLQLRKDV EKALKDAELR ERTEALKAAE QAAAEYGFSL DEVLSGPAKG AARKSKASPK YRNPENPDET WTGRGRKPHW VHTALSNGVD ISDLEI
|
| |