Gene TM1040_3103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3103 
Symbol 
ID4075550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp72590 
End bp73012 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content49% 
IMG OID638004605 
Producthypothetical protein 
Protein accessionYP_611339 
Protein GI99078081 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.444488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGACA GGTTTGTAAA TCGGGTGTTC GCCACCCTTG GTCTTCAAAC CCAGTACATG 
TCCGCTCTGC TCTGGTTTCG TGTCTCTATT CGAACGCATC GAAAGGGCAT GGCCGAAAGC
CCAACGACCC CCCTCTTGGA AAAAGGAATT TCATATCTGT TTATCAATAT AGTTTACAAA
GAAAATGAAT CCACCCTGAT CTACGATAAA TGCTATCGAC AAAATGAATT CTATCAAGGG
TTGTGGATGA TCGGACACGT CTTCATCCGA GTGTTTTCGA TACTTGCGCC ACACCTGCGT
CTCGCGCGCC TCGTCATGCA GATGACACAA GCACGCAAAA GGGGGGGCAA AACGGGCGTT
AAAAAAACAC CCGCCCCGAA AGGCGGATGT TTCAGTCAGG AAGCTCTGTC GCGACATGCG
TGA
 
Protein sequence
MLDRFVNRVF ATLGLQTQYM SALLWFRVSI RTHRKGMAES PTTPLLEKGI SYLFINIVYK 
ENESTLIYDK CYRQNEFYQG LWMIGHVFIR VFSILAPHLR LARLVMQMTQ ARKRGGKTGV
KKTPAPKGGC FSQEALSRHA