Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3103 |
Symbol | |
ID | 4075550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 72590 |
End bp | 73012 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638004605 |
Product | hypothetical protein |
Protein accession | YP_611339 |
Protein GI | 99078081 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.444488 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGACA GGTTTGTAAA TCGGGTGTTC GCCACCCTTG GTCTTCAAAC CCAGTACATG TCCGCTCTGC TCTGGTTTCG TGTCTCTATT CGAACGCATC GAAAGGGCAT GGCCGAAAGC CCAACGACCC CCCTCTTGGA AAAAGGAATT TCATATCTGT TTATCAATAT AGTTTACAAA GAAAATGAAT CCACCCTGAT CTACGATAAA TGCTATCGAC AAAATGAATT CTATCAAGGG TTGTGGATGA TCGGACACGT CTTCATCCGA GTGTTTTCGA TACTTGCGCC ACACCTGCGT CTCGCGCGCC TCGTCATGCA GATGACACAA GCACGCAAAA GGGGGGGCAA AACGGGCGTT AAAAAAACAC CCGCCCCGAA AGGCGGATGT TTCAGTCAGG AAGCTCTGTC GCGACATGCG TGA
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Protein sequence | MLDRFVNRVF ATLGLQTQYM SALLWFRVSI RTHRKGMAES PTTPLLEKGI SYLFINIVYK ENESTLIYDK CYRQNEFYQG LWMIGHVFIR VFSILAPHLR LARLVMQMTQ ARKRGGKTGV KKTPAPKGGC FSQEALSRHA
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