| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3100 |
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| Symbol | |
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| ID | 4075547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 69504 |
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| End bp | 70241 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638004602 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_611336 |
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| Protein GI | 99078078 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.135621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAT CCATTCTCGT CACCGGCGCG AGTTCCGGTA TCGGCCGGGC GGTCGCGGAG
CTGTTCTTGG CGGAGGGCTG GATGGTCGGT CTCTTGGCAC GGCGCGTGGA GAAACTGGCG
GAGGTCGCCG AGGGTCAACG CTGTGCCGTG GTGCTGCCTG CAGATGTGAC CGACCCCGCC
GCCGTAGAGG CTGCATTTGA TCGCTTCTGC ACCGAGGCAG GGCGGATCGA TGTCTTGTTC
AACAATGCGG GGATTTTCAC CCCGCCGGGC ACCATCGATG AAATCGCGCT GGAGGATTGG
TTTGCGGCGG TGAATGTGAA CCTCAACGGG ATGTTCCTGA GCGCGCGGGC CGCATTTGCC
CGCATGCGCC ATCAAACCCC GCGGGGGGGA CGGATCATCA ACAATGGCTC CATCGCCGCC
CATGTGCCGC GCCCGGGCAC CGTGCCTTAT GCGGCGACAA AGGCTGCGAT CACCGGGCTT
ACCAAATCGC TGTCTCTGGA TGGGCGGGCC TATGACATTG CCTGTGGGCA GATCGATATC
GGCAATGCCC GCACGCCGAT GGTTGCAGAT CTGGCGCAGC GCATGGCCGA GGCCAATCCC
GAGGCGCCGC CGATGGACTC CTTTGACGTG GGCGATGCGG CGCGATCAGT GCTGCATATG
GCGGAGTTGC CACTGGAGGC CAATGTGCAG TTCATGACCG TGATGGCGAC CAAGATGCCC
TATATCGGGC GCGGCTGA
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| Protein sequence | MTKSILVTGA SSGIGRAVAE LFLAEGWMVG LLARRVEKLA EVAEGQRCAV VLPADVTDPA
AVEAAFDRFC TEAGRIDVLF NNAGIFTPPG TIDEIALEDW FAAVNVNLNG MFLSARAAFA
RMRHQTPRGG RIINNGSIAA HVPRPGTVPY AATKAAITGL TKSLSLDGRA YDIACGQIDI
GNARTPMVAD LAQRMAEANP EAPPMDSFDV GDAARSVLHM AELPLEANVQ FMTVMATKMP
YIGRG
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