| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3098 |
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| Symbol | |
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| ID | 4075545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 67629 |
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| End bp | 68621 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638004600 |
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| Product | hypothetical protein |
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| Protein accession | YP_611334 |
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| Protein GI | 99078076 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0730] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.075635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTCC GTCCCATGGG GTGCCGCGTT GCAGCATGCC CATGCCCATC CGCCAGCAGA
AGACGCCCCA GGGATATGAA TATTTACCTC CCCATCGCCG AAGTGGCCGT GAATGCGTTC
CTGATTCTGG GACTGGGTGG CATGGTTGGG GTGCTGTCCG GCATGTTTGG GGTCGGCGGC
GGGTTCCTTC TGACGCCGCT TTTGTTCTTT ATCGGCATCC CGCCAGCGGT TGCCGTGGCC
ACTGGCGCCA ATCAGATCGT GGCCTCTTCG GTGTCTGGCG TTCTGGCACA TCTGCGTCGC
CGCACCGTAG ACCTCAAGAT GGGAGCCGTG CTGCAACTCG GGGGTCTCAT CGGCGCGGGA
TTAGGCGTTG CGATTTTCAA TTATCTGAAG TCGCTGGGGC AAATCGATCT CTTTGTGACG
CTCTGCTATG TGGTTTTCCT CGGGATAGTC GGCGGTCTCA TGTTCATCGA GAGCGTAAAC
GCCCTGCGCA AATCCAAACG CGGCGGCGCG CCCAAACGCC GCCAGCGCGG CTGGGTTCAT
AGCCTGCCCT TCAAGATGCG CTTTCGCACG TCCGGGCTCT ATATCTCTGT GCTCCCACCT
GTCGCCGTCG GGCTCTTTGT GGGGATGCTC ACCGCGATCA TGGGGGTCGG TGGCGGCTTC
ATCATGGTGC CTGCGATGAT CTACCTCTTG GGCATGCCAA CCAAGGTTGT GGTCGGCACC
TCGCTGTTCC AGATCATCAC CGTGACCGCA GCCACCACCA TGATGCACGC GGTCACCAAC
CAGACCGTCG ACATCGTGCT CGCAGTCCTT CTGCTGATCG GCGGCGTGGT GGGCGCGCAA
TTTGGTACCC GCATCGGCAT GCTCCTCAAG GCCGAACAAC TGCGCATTCT TCTTGCGCTC
TTGGTGCTCC TTGTCTGCGG CAAGCTGGCG CTGGATCTCC TGTTGGAACC AAGCGAGCTG
TACTCGCTCA GCCCGCTCCG GGAGGTCCGC TGA
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| Protein sequence | MQLRPMGCRV AACPCPSASR RRPRDMNIYL PIAEVAVNAF LILGLGGMVG VLSGMFGVGG
GFLLTPLLFF IGIPPAVAVA TGANQIVASS VSGVLAHLRR RTVDLKMGAV LQLGGLIGAG
LGVAIFNYLK SLGQIDLFVT LCYVVFLGIV GGLMFIESVN ALRKSKRGGA PKRRQRGWVH
SLPFKMRFRT SGLYISVLPP VAVGLFVGML TAIMGVGGGF IMVPAMIYLL GMPTKVVVGT
SLFQIITVTA ATTMMHAVTN QTVDIVLAVL LLIGGVVGAQ FGTRIGMLLK AEQLRILLAL
LVLLVCGKLA LDLLLEPSEL YSLSPLREVR
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