| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3097 |
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| Symbol | |
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| ID | 4075544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 66500 |
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| End bp | 67507 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638004599 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_611333 |
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| Protein GI | 99078075 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.11064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTCC TGACACTCAT TCAGGTGTTT GACAGCACCG TTCGCATGGC GACCCCGCTA
CTGCTGGCCT GTCTTGCGGG TCTCTTCTCC GAACGCGCAG GCATTTTCGA CATCGGCCTT
GAGGGCAAGA TGCTGATGGC GGCGTTTTTC TCCGCTGCGG TTGCGGCCGT TACCGGCAAC
GTCTGGCTGG GCCTTCTGGC CGGGATTGGC GCGTCGCTGC TGCTCTCGGG GCTGCATGGA
CTGGCCTCGA TCACCTTCCG GGGCAATCAG CTGATCTCGG GTGTAGCGCT CAACTTCCTC
GCCTCCGGCC TGACCGTATT GATCGCCGAA AGCTGGTTCC GCCAGGGGGG CCGCACGCCG
TCGCTCTTGA CCGAAGGTCG TTTCAACGGG ATTGAACTGC CCTTTGCCAT CGGCCCTTCG
GACGCCGAGG CCGCCGGGCG CCCCCTGAGC GAAATGATCG CCGAAGCCAA TGTGATCCAG
CAGATCTGGT CCGAGTTGAT CTCCGGTCAT TCCATTCTGG TTTATGTGGC CGTCCTGATG
GTGCCGCTGA CGTGGTGGGT TCTGTTTCGC ACGCGGTTTG GCCTGCGCCT GCGCGCGGTG
GGGGAAAACC CGGCCGCCGT CGACACCGCA GGTGTGTCGG TGCGCAGCCT GCGCTTTGCC
GCCATTGGCA TCGCGGGCGT GCTCTGCGGT ATCGCCGGGG CCTATCTCGC CACCGGCCTG
CAGGCGGGCT TTGTCAAGGA AATGACCTCC GGGCGGGGAT ATATCGCGCT GGCCGCGCTG
ATCTTTGCCA AATGGCGCCC CTGGCACGCG CTTGGCGCCT GTCTGCTGTT TGGTCTGTTG
CAAGCGGTCG CTCTGCGGTT CCAGAGCATC CAGCTTGGCG GGGTTTCGAT CCCGGTGCAG
GTCATGGATG CCCTGCCCTA TGTGCTGACC GTTGTGATCC TTGCTGGTTT TGTCGGCAAG
GCAATCCCGC CGCGCGCCGG GGGTCAGCCC TATGTAAAGG AACGCTAA
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| Protein sequence | MDFLTLIQVF DSTVRMATPL LLACLAGLFS ERAGIFDIGL EGKMLMAAFF SAAVAAVTGN
VWLGLLAGIG ASLLLSGLHG LASITFRGNQ LISGVALNFL ASGLTVLIAE SWFRQGGRTP
SLLTEGRFNG IELPFAIGPS DAEAAGRPLS EMIAEANVIQ QIWSELISGH SILVYVAVLM
VPLTWWVLFR TRFGLRLRAV GENPAAVDTA GVSVRSLRFA AIGIAGVLCG IAGAYLATGL
QAGFVKEMTS GRGYIALAAL IFAKWRPWHA LGACLLFGLL QAVALRFQSI QLGGVSIPVQ
VMDALPYVLT VVILAGFVGK AIPPRAGGQP YVKER
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