Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3096 |
Symbol | |
ID | 4075543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 65406 |
End bp | 66500 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638004598 |
Product | inner-membrane translocator |
Protein accession | YP_611332 |
Protein GI | 99078074 |
COG category | [R] General function prediction only |
COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAGA TGCCTAAATG GGCCGATGTG GTGCTGATCC CTCTGATCAG CCTCCTGTTG GCCGCAGTGA TTTCCGCAAT CGTGATCCTC TTGATCGGAG AAAGCCCGAT CGAGGCGCTG AACCTCATGG TGAATGGCGC GCTGGGATCC ACCTATGGCT GGGGCTACAC GCTCTATTAC GCCACCAACT TCCTCTTTAC CGGGCTTGCG GTGGCGGTGG CCGCCCATGC GGGGCTCTTC AACATCGGCG GCGAGGGTCA GGCGATGATT GGCGGACTGG GTCTTGCGCT TGTCTGCCTC TATATTCCCT TCCCGCATTG GTCGATTGCG CTGATCTTTG CAGCCTTGGG CGCCGGGATC TTTGGCGCCG CCTGGGCAGC GATCCCCGCC TATCTGCAGG CCAAACGCGG CAGTCACATC GTGATCACCA CCATCATGTT CAACTTCATC GCTGCGGCGG TGCTCAACTA CATGCTGGTG AATGCCCTGA AACCCAAGGG CGCGATGGAC CCTTCCACCG CGAAATTCCC AGAAAGCGCT CAGCTGCCTT CTCTGCACGA GATCCTCGCG CCCATCGGCA TCGAGTTCTC CAAATCCGCT CCCGCCAATG TCACGCTCTT TGTGGGCATT GCCGCCTGTA TCGTCGTCTG GGGCCTCATC TGGCATACGC CGCTGGGCCA CGAAATCCGC GCCCTCGGCA AATCCGAGCG CGGCGCCGTC TATGCGGGCA TCTCGCCGGT GCGCACCGTC ATGATCACCA TGCTGATCTC CGGCGCGCTC TGCGGCTTGA TGGCCACCAA CAACGTCATG GGCGAGGCTG AGCGCCTGGT GCTGAACGCC ACCGAAGGCG CTGGCTTTAT CGGTATTGCG GTGGCCCTGA TGGGGCGCAA CCACCCGTTT GGGGTCTTCC TCGCGGCGAT CCTCTTTGGG TTCCTCTATC AAGGCGGCGC AGAGCTCGCG CTCTGGACCA ATATCCCCTC CGAGCTGATC GTGGTGATTC AGGCGCTTGT GATCCTCTTT ACCGGTGCGC TCGACAATAT GGTCCGCATG CCGATTGAAA AGATCTTCCT CGCCTTCCGG AAGGAGAACG CCTGA
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Protein sequence | MEKMPKWADV VLIPLISLLL AAVISAIVIL LIGESPIEAL NLMVNGALGS TYGWGYTLYY ATNFLFTGLA VAVAAHAGLF NIGGEGQAMI GGLGLALVCL YIPFPHWSIA LIFAALGAGI FGAAWAAIPA YLQAKRGSHI VITTIMFNFI AAAVLNYMLV NALKPKGAMD PSTAKFPESA QLPSLHEILA PIGIEFSKSA PANVTLFVGI AACIVVWGLI WHTPLGHEIR ALGKSERGAV YAGISPVRTV MITMLISGAL CGLMATNNVM GEAERLVLNA TEGAGFIGIA VALMGRNHPF GVFLAAILFG FLYQGGAELA LWTNIPSELI VVIQALVILF TGALDNMVRM PIEKIFLAFR KENA
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