| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3090 |
|---|
| Symbol | |
|---|
| ID | 4075537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008043 |
|---|
| Strand | + |
|---|
| Start bp | 59876 |
|---|
| End bp | 60520 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638004592 |
|---|
| Product | heme oxygenase |
|---|
| Protein accession | YP_611326 |
|---|
| Protein GI | 99078068 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.768796 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGG CTGGAGAAAT CGGCGGACGT GAGCGGCTCA GGCTGGCCAC CGACCCGCAG
CATCAGGAGA TGCATCATCA TCCTGTCATG GCGTGCCTGC TGGCCCCTTC CGTGACCCTC
GCGCAGATTG AGACCGCCTC GGCGGTCTCT CTTGGCGCAG CCAGGGAAAT CGAGCGCGCG
CGTGCAGCTT CGGGAGAATG GGCGGACTTT TCGCTCTCGG CTTACCTGCA GCGCTTGCAC
CATGGCCTGC CCGCACATCT GCAAACACAA CACGCGCCGC CGGTGGCATT GCCCACGGAT
CGCTACGCGG CACTTGGGGG GCTCTATGTC ATTCATGGCT CTGCGTTTGG GGCAACGCTG
ATTGCCAACA AGATCCGCGC GCATCTTGAT ATCGACCCGG CGCCCTATTT CCCGGCGATT
GACAAGACGA TCTGGCGCCG TCTGGTCGCA ACGCTCAACG CCATGACCGA AGAAGAGGCT
GATGCTGCTG TCCGGGGGGC ATGCCAGGCT TTTCTGCTCT TCAAACGCAT CGCGGACCGG
CAAACCCTGC AGCATACGTT GCAGGTTACA CCATTTGAGG CGCTGCACCA GCCGCAACCT
GTTGATGCGG CGATCAATGC CGCTGGCGCC ATCGCGGCAC CATAG
|
|---|
| Protein sequence | MTKAGEIGGR ERLRLATDPQ HQEMHHHPVM ACLLAPSVTL AQIETASAVS LGAAREIERA
RAASGEWADF SLSAYLQRLH HGLPAHLQTQ HAPPVALPTD RYAALGGLYV IHGSAFGATL
IANKIRAHLD IDPAPYFPAI DKTIWRRLVA TLNAMTEEEA DAAVRGACQA FLLFKRIADR
QTLQHTLQVT PFEALHQPQP VDAAINAAGA IAAP
|
|---|
| |