| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3088 |
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| Symbol | lipB |
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| ID | 4075535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 56519 |
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| End bp | 57196 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638004590 |
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| Product | lipoyltransferase |
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| Protein accession | YP_611324 |
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| Protein GI | 99078066 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0321] Lipoate-protein ligase B |
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| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTGAAT GGATCACCTC CGACGGTCTG GTCTCATATG AAGAGGCCAC CCGCTTCATG
GAAGAGCGCG CCGAGGCCAT TGCCGCAGGC GAGGCAGAAG AGTGCATCTG GCTGCTCGAA
CATCCGCCGC TGTACACCGC TGGCACCTCT GCGCGGATCG AAGACCTGAC GGACCCGGAC
CGCTTTCCCG TTCATGTGAC CAAACGTGGC GGGCAGTATA CCTACCATGG GCCGGGGCAG
CGGGTAATCT ATGTGATGCT CAACGTTGCC GAGCGCGGCA AGGACGTGCG GTGTTTCGTG
CGCCAGCTTG AACGCTGGGT GATTCTTGCT CTGGAAGAGT TCAATGTCAC GGGCCACATT
CGCGATGGTC GTGTTGGCGT CTGGGTGGAG CGACCGGAAA AGCCCCTCAC GCCCGCCGGT
GCCGTGGCCG AGGACAAGAT CGCAGCCATC GGTATCCGGC TGCGCAAATG GGTCAGCTTT
CACGGTATTT CTATCAACGT GGAGCCGGAT CTTTCGCATT TTTCGGGCAT CGTTCCCTGC
GGGATCAGCG AGCATGGGAC CACCAGCCTC GTCGACCTCG GCCTGCCCGT TACCTTGGCG
GATGTGGATG TCGCCCTGCG GCGCACGTTT GATCTGGCCT TCTCAGAAGA AGCCGCACCG
AGCTGCGACC TGGACTAA
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| Protein sequence | MVEWITSDGL VSYEEATRFM EERAEAIAAG EAEECIWLLE HPPLYTAGTS ARIEDLTDPD
RFPVHVTKRG GQYTYHGPGQ RVIYVMLNVA ERGKDVRCFV RQLERWVILA LEEFNVTGHI
RDGRVGVWVE RPEKPLTPAG AVAEDKIAAI GIRLRKWVSF HGISINVEPD LSHFSGIVPC
GISEHGTTSL VDLGLPVTLA DVDVALRRTF DLAFSEEAAP SCDLD
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