Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3083 |
Symbol | |
ID | 4075529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 51515 |
End bp | 51922 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638004584 |
Product | hypothetical protein |
Protein accession | YP_611319 |
Protein GI | 99078061 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGGCTA AGGCCCCTCT GCGCACCATG AGCAACGACC CGCTCCTCGA TGAGCTTAGA GCACATGAAG AACAGGTTTG GGATGCGCTG GTGCGCGGGG ACGCTGATCT GGACGCCTCA CTTCTCTGCC AGAGCTTTCT TGGCGTCTAT GGCGACGGTT TTGCCGACAA ATCTGCCCAT GTCGGACAAT TGGCCGAGGG CGCCACAGTG CAGAGCTATG CGCTCACCGA CCTGAGGGCG CGCGCCCTTG GTTCTGATCA CGCCATGCTC AGCTACCGAG CGCGGTTCAT GCGCCATCGG CGCAACCAGG CCGAAGACAT GTATGTGACC TCGATTTGGC AGCGCACCGA AGGCGGCTGG ATCAATATCT TCAGCCAAGA CACGGCTGCT GGTGAGGCCA CCGACTAA
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Protein sequence | MPAKAPLRTM SNDPLLDELR AHEEQVWDAL VRGDADLDAS LLCQSFLGVY GDGFADKSAH VGQLAEGATV QSYALTDLRA RALGSDHAML SYRARFMRHR RNQAEDMYVT SIWQRTEGGW INIFSQDTAA GEATD
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