Gene TM1040_3083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3083 
Symbol 
ID4075529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp51515 
End bp51922 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content61% 
IMG OID638004584 
Producthypothetical protein 
Protein accessionYP_611319 
Protein GI99078061 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGCTA AGGCCCCTCT GCGCACCATG AGCAACGACC CGCTCCTCGA TGAGCTTAGA 
GCACATGAAG AACAGGTTTG GGATGCGCTG GTGCGCGGGG ACGCTGATCT GGACGCCTCA
CTTCTCTGCC AGAGCTTTCT TGGCGTCTAT GGCGACGGTT TTGCCGACAA ATCTGCCCAT
GTCGGACAAT TGGCCGAGGG CGCCACAGTG CAGAGCTATG CGCTCACCGA CCTGAGGGCG
CGCGCCCTTG GTTCTGATCA CGCCATGCTC AGCTACCGAG CGCGGTTCAT GCGCCATCGG
CGCAACCAGG CCGAAGACAT GTATGTGACC TCGATTTGGC AGCGCACCGA AGGCGGCTGG
ATCAATATCT TCAGCCAAGA CACGGCTGCT GGTGAGGCCA CCGACTAA
 
Protein sequence
MPAKAPLRTM SNDPLLDELR AHEEQVWDAL VRGDADLDAS LLCQSFLGVY GDGFADKSAH 
VGQLAEGATV QSYALTDLRA RALGSDHAML SYRARFMRHR RNQAEDMYVT SIWQRTEGGW
INIFSQDTAA GEATD