| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3080 |
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| Symbol | ubiA |
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| ID | 4075526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 48203 |
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| End bp | 49165 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638004581 |
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| Product | 4-hydroxybenzoate polyprenyltransferase |
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| Protein accession | YP_611316 |
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| Protein GI | 99078058 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
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| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGGCC AGTCGCCAAC ACCAGATGGA CAAGTCGCGG ATGCGGTGAA AGACAATTGG
GTCGACATCT ATGCACCCGC CTGGACCCGC CCCTACCTGC GCCTGAGCCG TGCGGATCGC
CCCATCGGGA CCTGGCTCCT GCTGCTGCCC TGCTGGTGGG GATTGGCACT TGCGATGATC
GCCGGACAGG ATGCGCGCTG GGAGGATCTG TGGATCTTTG TGGCCTGCGC GCTTGGTGCG
TGGCTGATGC GCGGCGCGGG ATGCACCTGG AATGACATCA CTGATCGCAA CATCGACGGC
AGTGTCGAGC GCACCCGGTC GCGCCCCATT CCCTCCGGTC AGGTCTCTAT CAAAGGGGCG
CTCGCTTGGA TGGCCCTGCA ATCGCTGATC GCCTTTGGCA TCCTGCTGAC CTTCAATCAG
GCTGCGGTCG CGATGGGGAT TCTCGCGCTC TTCCCGGTGG CGATTTATCC CTTTGCCAAG
CGGTTTACCT GGTGGCCGCA GATTTTCTTG GGGCTCGCCT TTAACTGGGG TGCGATGCTG
GCGTGGGTGG CGCATACGGG CCATCTGAAC TGGCCTGCGG TGGTGCTTTA TGTGGCCGGG
ATCGCGTGGA CGCTCTTTTA TGACACCATC TATGCCCATC AGGATGCCGA GGATGATGCC
CTGATCGGGG TGAAATCTAC GGCACGGCTC TTTGGCACCA ACACGCCAAC CTGGCTGCGC
CGCTTTATTG TTGCCACCGT GAGCCTGATG GCGCTTGCAA TCATCATGGC CGTACAGCCC
GCTGCCTCGG TTCTGGCGTT GGCGCTCTCG CTCTGTGCAC CCTGGGCGAT GGGCTGGCAT
ATGACATGGC AGTTGCGCGC CTTTGACGCC GACAACAACG ACCGCCTCCT GTCGCTGTTT
CGGCTCAACC GGGACACCGG CTTGATTCCG CTCATTTTCC TTGGGCTGGC CCTGTTTGCC
TGA
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| Protein sequence | MQGQSPTPDG QVADAVKDNW VDIYAPAWTR PYLRLSRADR PIGTWLLLLP CWWGLALAMI
AGQDARWEDL WIFVACALGA WLMRGAGCTW NDITDRNIDG SVERTRSRPI PSGQVSIKGA
LAWMALQSLI AFGILLTFNQ AAVAMGILAL FPVAIYPFAK RFTWWPQIFL GLAFNWGAML
AWVAHTGHLN WPAVVLYVAG IAWTLFYDTI YAHQDAEDDA LIGVKSTARL FGTNTPTWLR
RFIVATVSLM ALAIIMAVQP AASVLALALS LCAPWAMGWH MTWQLRAFDA DNNDRLLSLF
RLNRDTGLIP LIFLGLALFA
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