| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3072 |
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| Symbol | |
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| ID | 4075166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 41351 |
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| End bp | 42661 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638004573 |
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| Product | dihydroorotase |
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| Protein accession | YP_611308 |
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| Protein GI | 99078050 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
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| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.490545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGC TTTTCCTCAA CGCCCGCCTG ATCGATCCCG AAACAGGCAC CGACGCGCCT
GGCAGCCTCC TGGTGCAACG TGGCAAGATC CTCGCCCGCG CTGATCAAAG CGACAAGGAG
ATGTTTCTTG CGGACAACGG TCTGCGCACC AAAGACGTGC AGATGGTGGA CTGCAACGGC
AAATGCCTTG CCCCCGGGAT CGTGGACATC GGCGTCAAGG TTTGCGAGCC GGGCGAGCGG
CACAAGGAGA GCTACAAATC CGCAGGGCTT GCAGCTGCCG CGGGTGGTGT GACCACCATC
GTGACCCGCC CTGACACCTC CCCCTGCATC GACAGCCCTG AGACGCTGGA ATTCGTCACG
CGGCGCGCGC AAGCAGATGC ACCGGTCAAT GTCCTGCCGA TGGCGGCTCT GACTAAGGGG
CGCGAAGGTC GTGAGATGAC CGAAATCGGC TTTTTGCTGG ACGCTGGCGC CGTGGCCTTC
ACCGATTGCG ATCATGTGGT CACAAGTACC AAGGTGCTGT CGCGCGCCCT GACCTATGCC
AAAAGCTGCG GCGCGCTGGT CATTGCGCAT CCGCAGGAAC CCGGCCTCTC TCAGGGGGCG
GCAGCCACAT CCGGAAAGTT CGCGGCGCTG CGCGGGCTGC CTTCTGTGTC TCCGATGGCC
GAGCGCATGG GGCTTGATCG CGATATCGCA TTGCTGGAGA TGACCGGCGC CAAGTATCAC
GCCGATCAGA TCACCACCGC GCGCGCGCTG CCCGCGCTGG AACGCGCCAA GGCAAACGGG
CTCGACATTA CGGCGGGGAC ATCCATCCAC CATCTCACCC TGAATGAGCT GGACGTGGCC
GACTATCGCA CCTTCTTCAA GGTGAAGCCG CCGCTTCGGT CCGAAGATGA TCGCCTCGCG
GTGGTCGAGG CGGTACGCAG CGGGCTCATT GATGTGATCT CCTCCATGCA CACACCGCAG
GACGAAGAAA GCAAGCGGTT GCCCTTTGAA GAGGCCGCCG CCGGTGCGGT TGCGCTCGAG
ACCCTGTTGC CAGCGGCAAT GCGGCTCTAT CACGCCGAGC TTCTGGACCT GCCAACGCTG
TTTCGTGCCA TGGCGCTTAA CCCGTCTCGA CGGCTTGGGC TTGCCTCCGG ACGACTGAGC
GCGGGCGCAC CTGCGGATCT CGTGCTGTTT GACCCCGACG CCCCCTTGGT GCTGGATCGT
TTCAAGCTGC AGTCGAAATC CAAGAACACG CCTTTTGACA CCCAGCGGAT GCAGGGACGT
GTCTTGGCAA CCTATGTGGC CGGTGAGCCC GTTTATCGAA AGGACGCATG A
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| Protein sequence | MTTLFLNARL IDPETGTDAP GSLLVQRGKI LARADQSDKE MFLADNGLRT KDVQMVDCNG
KCLAPGIVDI GVKVCEPGER HKESYKSAGL AAAAGGVTTI VTRPDTSPCI DSPETLEFVT
RRAQADAPVN VLPMAALTKG REGREMTEIG FLLDAGAVAF TDCDHVVTST KVLSRALTYA
KSCGALVIAH PQEPGLSQGA AATSGKFAAL RGLPSVSPMA ERMGLDRDIA LLEMTGAKYH
ADQITTARAL PALERAKANG LDITAGTSIH HLTLNELDVA DYRTFFKVKP PLRSEDDRLA
VVEAVRSGLI DVISSMHTPQ DEESKRLPFE EAAAGAVALE TLLPAAMRLY HAELLDLPTL
FRAMALNPSR RLGLASGRLS AGAPADLVLF DPDAPLVLDR FKLQSKSKNT PFDTQRMQGR
VLATYVAGEP VYRKDA
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