| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3070 |
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| Symbol | pyrB |
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| ID | 4075164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 39746 |
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| End bp | 40705 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638004571 |
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| Product | aspartate carbamoyltransferase catalytic subunit |
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| Protein accession | YP_611306 |
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| Protein GI | 99078048 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.87496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCCC CCTCTTTCGA CCAGCCTCAC CTCCTCGGGA TCGAGCCCCT CAGGCCACAT
GAGATCACCG CCATTCTGGA TCTGGCCGAA GATTACGTGG CGCTCAATCG GCAGACCGAG
AAGCACTCCG ATGCGCTGGC GGGGCTGACG CAGATCAACA TGTTCTTTGA AAATTCCACC
CGCACGCAGG CCAGCTTTGA GCTCGCCGGC AAGCGACTCG GCGCGGATGT GATGAACATG
GCGATGCAGG CCTCATCGAT CAAGAAGGGC GAGACGCTCA TCGACACCGC GATGACGCTC
AATGCCATGC ATCCGGATCT TCTGGTGGTG CGCCATCCTC ACTCCGGCGC GGTGGACCTC
TTGGCGCAAA AGGTGAACTG CGCGGTGCTG AACGCAGGCG ATGGGCGCCA TGAACATCCG
ACGCAGGCGC TTTTGGACGC GCTGACGATC CGGCGCGCCA AGGGTCGTCT GCATCGGCTG
AACATCGCGA TTTGTGGCGA TGTCACCCAT TCGCGAGTGG CGCGCTCCAA CCTGATCCTG
CTGGGCAAGA TGGAAAATCG CATTCGCCTG ATCGGCCCGC CAACGCTGGT GCCACAGCAA
TTTGCGGAGT TTGGCGCCGA GATCTATGAC GATATGCGCG AAGGTCTAAA AGACGTCGAT
GTCGTGATGA TGCTGCGGCT CCAAAAAGAG CGGATGGACG GCGGTTTCAT TCCTTCGGAA
CGCGAGTATT TCTATCGCTA CGGTCTGGAT GCGGAAAAAT TGGCACTGGC CAAACCCGAC
GCCATCGTCA TGCACCCCGG GCCGATGAAC CGCGGCGTAG AAATCGACGG GACCATCGCT
GATGATATCA AACGCTCCGT AATCCAAGAG CAGGTCGAAA TGGGCGTGGC CGTTCGCATG
GCCGCGATGG ATCTTCTTGC GCGCAACCTG CGGGCGGCGC GTCAGAAACA GGCGTCCTGA
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| Protein sequence | MQPPSFDQPH LLGIEPLRPH EITAILDLAE DYVALNRQTE KHSDALAGLT QINMFFENST
RTQASFELAG KRLGADVMNM AMQASSIKKG ETLIDTAMTL NAMHPDLLVV RHPHSGAVDL
LAQKVNCAVL NAGDGRHEHP TQALLDALTI RRAKGRLHRL NIAICGDVTH SRVARSNLIL
LGKMENRIRL IGPPTLVPQQ FAEFGAEIYD DMREGLKDVD VVMMLRLQKE RMDGGFIPSE
REYFYRYGLD AEKLALAKPD AIVMHPGPMN RGVEIDGTIA DDIKRSVIQE QVEMGVAVRM
AAMDLLARNL RAARQKQAS
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