| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3061 |
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| Symbol | |
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| ID | 4075155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 29742 |
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| End bp | 30509 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638004562 |
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| Product | phage SPO1 DNA polymerase-related protein |
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| Protein accession | YP_611297 |
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| Protein GI | 99078039 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.247484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATCGG AGCTGGATTA TTGGAGCGCA AAAGCGCTGT TGGAGTGGCA GGTAGAACTT
GGCGCTACCG AAGCCATGAT GGACACGCCC ATCGACCGCT ACGGGCTCGA GGATCAGAAA
CCCAAACCCG CACGCGCAGC AGACACGCCG CCAACACCTG TCAAACCCAA AACTGTTGAC
CCGGTTGCAG AGGCAGCGAA GCTTGCCAAA ACGGCGCAGG CGCTGCCGAG CCTGCGTGCC
GCGCTTGAAC AGTTTGAACA TTGCGACCTC AAGCGGGGCG CGCGCAATCT GGTGTTCTCG
GACGGCCAGG CAGGCGCCCG CGTGATGATC ATTGGCGAGG CCCCGGGGCG AGATGAAGAT
CTGCAGGGCA AACCCTTTGT GGGCCGGGCC GGGCAGCTTC TGGACAAGAT GCTCGATGCC
ATCGAGCTCA GCCGCGAGAA AAACGTTTAT ATCACCAACG TTCTGCCTTG GCGCCCCCCG
CAGAACCGCG ATCCGCTGCC GGCGGAAATT TCGATGCTTG TGCCATTTCT CGAGCGTCAC
GTCGCCTTGG CAGAGCCGGA TATTTTGGTC CTTATGGGCA ATATCTCCTG TCAGGCCGTG
CTTGGCAAAC GCGGCATCAC CCGCCTGCGT GGCACGTGGT CCGAAGCCTG GGGCAAACCC
GTGATCCCGA TGTTCCACCC CGCTTACCTC TTGCGCCAAG CCCATGCCAA ACGCCAAGCC
TGGGCGGATC TTCTGGAGCT GCGCGCCCGT CTGAACAGTC TCAACTGA
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| Protein sequence | MESELDYWSA KALLEWQVEL GATEAMMDTP IDRYGLEDQK PKPARAADTP PTPVKPKTVD
PVAEAAKLAK TAQALPSLRA ALEQFEHCDL KRGARNLVFS DGQAGARVMI IGEAPGRDED
LQGKPFVGRA GQLLDKMLDA IELSREKNVY ITNVLPWRPP QNRDPLPAEI SMLVPFLERH
VALAEPDILV LMGNISCQAV LGKRGITRLR GTWSEAWGKP VIPMFHPAYL LRQAHAKRQA
WADLLELRAR LNSLN
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