Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3058 |
Symbol | |
ID | 4075152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | - |
Start bp | 25759 |
End bp | 26748 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638004559 |
Product | beta-lactamase-like |
Protein accession | YP_611294 |
Protein GI | 99078036 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGAGG CGATCGAGGT CGCTGAGGGT GCCCTCTGGA TGCGCCTGCC GCTGCCGATG AAACTTGACC ACGTCAATGT CTATGCCTTT GACGAGGGTG ACAGCTGGAC CGTGGTCGAT ACAGGCATGT CCTCGAACAA GACTCGCCGT ATCTGGGAGC AGCTGATGGC GGGTCCGCTG GGTGGTAAAC CGGTGCGCCG TGTCGTCGTC ACCCACCATC ATCCGGACCA CATCGGCAAC GCTGGTTGGT TTCAGTCCGA GCATGGCGCA GAACTCGTGA CCACCCGCAC CGCGTGGCTT TTTGCGCGCA TGCTGACGTT GGATGTGCAG GAAAGCTGGC CCGAGGAGAC GCTGGCCTAT TATCGCAGTG CGGGCATGGA CCCTGAGGTC TATGACACCC GTAAGGCCGA CCGCCCCTTC AATTTTGCGG ATACGGTCTA TCCGATGCCT TTGGGATTCA CCCGCGTGCA ACAGGGCGAT GTGTTTCGCA TGGGCGGGCG CGACTGGGAC ATCCACATGG GCAACGGTCA TGCGCCGGAA CACGCAACCC TCTGGAGTCG TGACGACAAT CTGGTTCTGA CGGGGGATCA GGTTCTGTCT TCGATCAGCC CGAACATCGG CGTGTACGCC ACCGAACCCG AGGCCGACCC GCTGGCGGAA TGGCTGGAGG CCTGCGAACG GCTGGCGGCG CTCGCGCGGC CCGAGCATCT GGCGCTTGGA GGGCATAAGC TGCCCTTTAC CCGCTTGCCT CTCAGGATGC GGCAGTTGAT CGACAACCAT CACGGTGCGC TCGAGCGGCT TATGGAGTTC CTCGAGACGC CCAAAAGCGC AGCAGAGTGT TTTCCAACGC TTTTCAAGCG CACGATTGGT CCCGGCGAGT ATGGCCTCGC GCTTGTCGAA GCGGTGGCCC ATGTGAACCA TCTCTATCGC ACAGGGCAGG TGACGCGAAC ACGGCGCAGT GATGAGGCTT GGGTTTACCA GCGCCGCTAG
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Protein sequence | MGEAIEVAEG ALWMRLPLPM KLDHVNVYAF DEGDSWTVVD TGMSSNKTRR IWEQLMAGPL GGKPVRRVVV THHHPDHIGN AGWFQSEHGA ELVTTRTAWL FARMLTLDVQ ESWPEETLAY YRSAGMDPEV YDTRKADRPF NFADTVYPMP LGFTRVQQGD VFRMGGRDWD IHMGNGHAPE HATLWSRDDN LVLTGDQVLS SISPNIGVYA TEPEADPLAE WLEACERLAA LARPEHLALG GHKLPFTRLP LRMRQLIDNH HGALERLMEF LETPKSAAEC FPTLFKRTIG PGEYGLALVE AVAHVNHLYR TGQVTRTRRS DEAWVYQRR
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