Gene TM1040_3057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3057 
Symbol 
ID4075151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp25251 
End bp25712 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content58% 
IMG OID638004558 
Producthypothetical protein 
Protein accessionYP_611293 
Protein GI99078035 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGACA AGATCTCCAC CAGCGCGGAA CTGGCAGAAG CGGCCGCGCT CCCCTGCCAC 
CGGGAGGTAC ATACCAACCC TGATGCGCCC GAAGCGCTGA AGGATGTGCC CGAGGAGATG
CAAAAAGTGC CCGCGCCCGA GCAGAAAAGC CCGGCGCGGT GGGCCTATGA ACGGCTGATC
CTCTATATTC AGAATTTTGA AAAGACCCTC GATGGCGAGC ATGAGGTTGC CATGGGGTTT
GCGGGCGGTG ATGCGGGCGT GTTGCGCATC GAGGGGATGG GGTATTTTGA TCCCGACATT
GTCACGTTCT ACGGCAGCGA CGAACGCGGC GGTAAAACGC AATTAGTTCA GCATGTTAGC
CAGCTAAATG TGATCTTGCG CGCAATGTCG AAACCAAAGC CGGAAGAACC CGCAAAGCGG
ATCGGTTTTC GGTTGGTGGC AGAGCTTGAA GAGCACGCCT GA
 
Protein sequence
MDDKISTSAE LAEAAALPCH REVHTNPDAP EALKDVPEEM QKVPAPEQKS PARWAYERLI 
LYIQNFEKTL DGEHEVAMGF AGGDAGVLRI EGMGYFDPDI VTFYGSDERG GKTQLVQHVS
QLNVILRAMS KPKPEEPAKR IGFRLVAELE EHA