Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3057 |
Symbol | |
ID | 4075151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | - |
Start bp | 25251 |
End bp | 25712 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638004558 |
Product | hypothetical protein |
Protein accession | YP_611293 |
Protein GI | 99078035 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGACA AGATCTCCAC CAGCGCGGAA CTGGCAGAAG CGGCCGCGCT CCCCTGCCAC CGGGAGGTAC ATACCAACCC TGATGCGCCC GAAGCGCTGA AGGATGTGCC CGAGGAGATG CAAAAAGTGC CCGCGCCCGA GCAGAAAAGC CCGGCGCGGT GGGCCTATGA ACGGCTGATC CTCTATATTC AGAATTTTGA AAAGACCCTC GATGGCGAGC ATGAGGTTGC CATGGGGTTT GCGGGCGGTG ATGCGGGCGT GTTGCGCATC GAGGGGATGG GGTATTTTGA TCCCGACATT GTCACGTTCT ACGGCAGCGA CGAACGCGGC GGTAAAACGC AATTAGTTCA GCATGTTAGC CAGCTAAATG TGATCTTGCG CGCAATGTCG AAACCAAAGC CGGAAGAACC CGCAAAGCGG ATCGGTTTTC GGTTGGTGGC AGAGCTTGAA GAGCACGCCT GA
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Protein sequence | MDDKISTSAE LAEAAALPCH REVHTNPDAP EALKDVPEEM QKVPAPEQKS PARWAYERLI LYIQNFEKTL DGEHEVAMGF AGGDAGVLRI EGMGYFDPDI VTFYGSDERG GKTQLVQHVS QLNVILRAMS KPKPEEPAKR IGFRLVAELE EHA
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