| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3052 |
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| Symbol | |
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| ID | 4075146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 21606 |
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| End bp | 22877 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638004553 |
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| Product | amidohydrolase |
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| Protein accession | YP_611288 |
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| Protein GI | 99078030 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCATG CTCCTGGGGC GCAATCCCGC CTGTCTGCCT CCCGTTTGAC CGAGGCCCGT
CTGCCCGGCG TCGCCGTTCC CGCCGCTCTC GTTGCCTCTG CCGACCGCTT TGGGGGCCAG
CCGCAGGGCG AGCACCTGGT GGGCGACCTT GTGCTGCGAA ACGGGCGTGC TGAGCGGCTC
GAGGCCGCGA CGGTGCCGCC CCGGAGATTG GTGCTGCCAA AACTCACAGA GCCGCATGTG
CATCTCGACA AGTGCCACAC GATCTACCGA ATGGACGGGG TCGGCGGCGG TCTGGAAGAT
GCGATTTCGG CGCAGGCTCT GGACCGGGAA ACCTGGACTG CTGATGATAT TCGCGCGCGG
GCGGGGCGGG GACTGGGAGA GCTCCTGGCC GCGGGCTGTT CTGCTGTGCG TTCCCATGTG
GATTGGGGCA GCGGGCGCGA CCCGGCGCAG GCCCCACTGG CCTGGGATAT CCTGAGGGAG
CTGGCCCAAG ACGCCTCGGA TGCGGTGATC GTGCAGCGTG CGGCGCTGAC AGGAGCCGAC
AGGATGGCCG ACATCGGCTA TGCGCGGGCT TGCGCTGCGC GCGTGGCCCA GAGCGGCGGC
GTGCTTGGAT CCTTTGTGCT GAACCAGCCG GGTCGCAAAG AGGGCATCGC CAATATCTTT
CGCGTTGCAG AGGATATGGG GCTGGCTCTT GATTTTCACG TCGACGAAGG CCTCGCGCGG
GGGCTCGACG GCTTGGAGAT GATCGCCGAC GCCGCTCTCG CCACCCGGTT CGGCGGACCG
GTTCTCTGCG GCCATGCCTG CAGCCTGATG AACCGCTCCG ATGAGGATGT GCGGCGGATT
GCCGAAAAGC TCGCCCGCGC TGAAATCTCC GTGGTCGCGC TTCCGACCAC CAATCTGTAC
TTGCAGGGGC GCAACAACGG CACGCCGGAC CGCCGGGGGC TGACGCGGAT TCACGAGCTT
GCTGCTGCAG GCGTAAACGT GGTGCTCGGC GCGGACAATG TGCGCGATGC CTTCTGCCCG
CTCGGCAGTC ACGACCCGCT GGCGACGCTT TCGCTGGCGG TGCTTGCCGG GCATCTCGAT
CCGCCTTTTG GCGACCATCT ACCCATGATC ACCACCGGCG CACGCCGCGC GCTTGGCCTT
GCCCCCGTGA CCGTCGACGG GGCTGCAATC GGGGATCTGC AGCTGTTCGA CGCGCTTTTG
GTCACGGACA TTCTGGGCAG CCGATCTGCG CCGCGTCCCC TGACCGACGA TTTGCCAGGA
GCCTCCCTAT GA
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| Protein sequence | MSHAPGAQSR LSASRLTEAR LPGVAVPAAL VASADRFGGQ PQGEHLVGDL VLRNGRAERL
EAATVPPRRL VLPKLTEPHV HLDKCHTIYR MDGVGGGLED AISAQALDRE TWTADDIRAR
AGRGLGELLA AGCSAVRSHV DWGSGRDPAQ APLAWDILRE LAQDASDAVI VQRAALTGAD
RMADIGYARA CAARVAQSGG VLGSFVLNQP GRKEGIANIF RVAEDMGLAL DFHVDEGLAR
GLDGLEMIAD AALATRFGGP VLCGHACSLM NRSDEDVRRI AEKLARAEIS VVALPTTNLY
LQGRNNGTPD RRGLTRIHEL AAAGVNVVLG ADNVRDAFCP LGSHDPLATL SLAVLAGHLD
PPFGDHLPMI TTGARRALGL APVTVDGAAI GDLQLFDALL VTDILGSRSA PRPLTDDLPG
ASL
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