Gene TM1040_3045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3045 
Symbol 
ID4075139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp14630 
End bp15097 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content57% 
IMG OID638004546 
Producthypothetical protein 
Protein accessionYP_611281 
Protein GI99078023 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACC TCACTCTCTC AATTGCCCTA CTGATCACAG CTGGCGCCGC GCAGGCTGGC 
CGGTTTTGCG AGCTTGATGG CACCGAAGTA TTCTCCTGCA CCTTCAAAGA TGGCACACGC
GGGGTCGAAG TGTGCAACGC TATCTGGGCG GAGGGATCAA AGGTCGCCTA TGGGTTCTTC
AAATCCGACG GTACGGTCGA GAAAGAAATC CTTCAGGACA TGGCAACACT GGAGGCTGCT
CCGTGGAATG GACTGGGCGC CTTCATGAGT GAATCCGTGA CCTTTGATGG CGGAGGCGGC
TATTCCTATG AGGTCTGGTC GGGCAGTGAA CGCGCGGCGG ATGCGACACA GATCGGCGGG
ATCAATGTTC TGCGCGACGG GGCGTTGATC GCGGATCTGA GCTGCGACAC AGGCACCGTC
CAAAGTGACC TCTCCGGTCT CATCGAGATC ATTGAAGCCG CAGAATAG
 
Protein sequence
MKHLTLSIAL LITAGAAQAG RFCELDGTEV FSCTFKDGTR GVEVCNAIWA EGSKVAYGFF 
KSDGTVEKEI LQDMATLEAA PWNGLGAFMS ESVTFDGGGG YSYEVWSGSE RAADATQIGG
INVLRDGALI ADLSCDTGTV QSDLSGLIEI IEAAE