| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3039 |
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| Symbol | |
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| ID | 4075133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 6188 |
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| End bp | 6838 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638004540 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_611275 |
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| Protein GI | 99078017 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGGATC TGGTGCCGAT CCTTTTGGGC TATGTGCCGC TAACGCTGTT CATGGCAGTG
ATCGGTATGG CCTGCGCGCT CGTGCTGGCC TCCATTCTGG CAGTCGAGCG CGTGTTTCAG
ATCCCGGTTC TGGACGCCTT CGTACGCCTC TTCATCAGCT TCTTTCGCGG CACGCCGCTT
CTGGTACAGT TGTTCCTGTT CTATTACGGC TTGCCGCAGG TGCTGGGGTT CCTCGGTTCC
ATTGACGGCG TTACGGCGAC GATCATGGGG CTGACGCTGC ATTTCTCGGC CTATATGGCC
GAGAGCATCC GTGCCGCAAT CCTTGGTGTT GACCGGAGTC AGTGGGAGGC CGCCCAGGCC
GTCGGGATGA CGCAGGGGCA GATGATGCGA CAGATCATCC TGCCCCAGGC CGCCCGCGTC
GCAGCGCCGA CCCTGGTCAA CTACTTCATT GACATGATCA AAGGCACCTC TCTCGCCTTT
ACGCTAGGCG TCACAGAGCT GATGGGGGCA ACCCAGAAAG AAGCCGCCGG GAGCTTTCTC
TACTTTGAAG CCTTCTTGGT GGCCGCCGCG ATCTATTGGA TCCTTGTCGA GGCACTGTCC
TTTGGCCAGC GTCACCTGGA AACCTACCTC AACAAGGCGC ATGCGAGATG A
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| Protein sequence | MWDLVPILLG YVPLTLFMAV IGMACALVLA SILAVERVFQ IPVLDAFVRL FISFFRGTPL
LVQLFLFYYG LPQVLGFLGS IDGVTATIMG LTLHFSAYMA ESIRAAILGV DRSQWEAAQA
VGMTQGQMMR QIILPQAARV AAPTLVNYFI DMIKGTSLAF TLGVTELMGA TQKEAAGSFL
YFEAFLVAAA IYWILVEALS FGQRHLETYL NKAHAR
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