| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_R0083 |
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| Symbol | |
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| ID | 4074892 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008042 |
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| Strand | - |
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| Start bp | 8752 |
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| End bp | 11595 |
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| Gene Length | 2844 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | 640715078 |
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| Product | 23S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GATCAGATCA AGCGCGAGAA GGGCGTTTGG TGGATGCCTT GGCAGTAAGA GGCGATGAAG
GACGTGATAC TCTGCGATAA GCTTGGGGGA GCCGAGAATA GGCTTTGATC CCAGGATTTC
CGAATGGGGG AACCCACTTG AAAGTTTGAT ATAATAGCGA CTTCGGTTGC TGCTTATATC
TGGCTTAATC AAGTACTTAT TACCTGAATA CATAGGGTTT TAAGAGCAAA CCCGGGGAAC
TGAAACATCT AAGTACCCGG AGGAAAGGAC ATCAATAGAG ACTTCCCTAG TAGCGGCGAG
CGAACGGGAA CCAGCCGAGC CTGATGAGTG ACTAGAATGT GTTGGGAAGC ACAGCCATAG
CGGGTGACAG CCCCGTATAG GAAGCTCTGA GGGACGTATT AAGTAGGGCG GGACACGTGA
AATCCTGTCT GAAGATCGGA GGACCACCTC CGAAGGCTAA GTACTCCTTA CTGACCGATA
GCGAACCAGT ACCGTGAGGG AAAGGTGAAA AGCACCCCGA CGAGGGGAGT GAAACAGTAC
CTGAAACCGA ACGCCTACAA TCAGTTGGAG GCTCCTTGCG AGCTGACAGC GTACCTTTTG
TATAATGGGT CATCGACTTG GTCTTACGAG CAAGCTTAAG CCGTTAGGTG TAGGCGCAGC
GAAAGCGAGT CTTAATAGGG CGCATGAGTT CGTGGGATCA GACCCGAAAC CGAGTGATCT
AGGCATGACC AGGATGAAGG TGCGGTAACA CGCACTGGAG GTCCGAACCC ACACCTGTTG
AAAAAGGTCG GGATGAGTTG TGCCTAGGGG TGAAAGGCCA ATCAAACTCG GAGATAGCTG
GTTCTCTGCG AAATCTATTT AGGTAGAGCG TCATCCGAAT ACCCCGGGGG GTAGAGCACT
GGATGGGTAA TGGGGCCCCA CAGGCTTACT GATCCTAACC AAACTCCGAA TACCCGGGAG
TACTAGATGG CAGACACACT GCGGATGCTA ACGTCCGTAG TGGAGAGGGA AACAACCCTG
ACCTCCGGCT AAGGCCCCTA ATTCATGGCT AAGTGGGAAA GCAGGTGGGA TGTCCAAAAC
AACCAGGAGG TTGGCTTAGA AGCAGCCATC CTTTAAAGAT AGCGTAACAG CTCACTGGTC
TAAATAAGAC GTCCTGCGGC GAAGATGTAA CGGGGCTCAA GCCATGAGCC GAAGCCGAGG
ATGCACATAG TGCATGGTAG CAGAGCGTAG TGTGACATAG AACAGCTCCT CCTTAGACCC
CTCGGGGTCA TTGGAGGAAC AGTTCTTTCG ATGAAGCGGG CGCGTGAGCG ATCCCGTGGA
GAGATCACTA GCGAGAATGA TGACATGAGT AGCGACAAAG AGTGTGAGAG ACACTCTCGC
CGAAAGTCCA AGGGTTCCTG CTTAAAGCTA ATCTGAGCAG GGTAAGCCGG CCCCTAAGCC
GAGGCCGAAA GGCGTAGGCG ATGGGAACCA GGTTAATATT CCTGGGCCAG GAGGATGTGA
CGGATCATGA AGGTTGTTCG CCCTTATCGG ATTGGGCGGG CCGCTGATTG GTCCCTGGAA
ATAGCCCTCC ATCAGACCGT ACCCTAAACC GACACAGGTG GACTGGTAGA GAATACCAAG
GCGCTTGAGA GAACGATGTT GAAGGAACTC GGCAAAATAC CTCCGTAAGT TCGCGAGAAG
GAGGCCCGGG TCCTACGCAA GTGGAATCCG GGGGCACAAA CCAGGGGGTG GCGACTGTTT
ATTAAAAACA CAGGGCTCTG CGAAGTCGCA AGACGACGTA TAGGGTCTGA CGCCTGCCCG
GTGCCTGAAG GTTAAAAGGA GGGGTGAGAG CTCCGAATTG AAGCCCAGGT AAACGGCGGC
CGTAACTATA ACGGTCCTAA GGTAGCGAAA TTCCTTGTCG GGTAAGTTCC GACCTGCACG
AATGGCGTAA CGACTTCCCC GCTGTCTCCA ACATCGACTC AGCGAAATTG AATTGCCTGT
CAAGATGCAG GCTTCCCGCG GTTAGACGGA AAGACCCCGT GCACCTTTAC TACAGCTTCG
CACTGGCATC AGGATTGTGA TGTGCAGGAT AGGTGGTAGG CATCGAAGCA GGAACGCTAG
TTCCTGTGGA GCCATCCTTG AGATACCACC CTTCGCACTC TTGATGTCTA ACCGCGGTCC
CTTACCGGGA TCCGGGACCC TGCGTGGCGG GTAGTTTGAC TGGGGCGGTC GCCTCCTAAA
GCGTAACGGA GGCGCGCGAA GGTGGGCTCA GAGCGGTCGG AAATCGCTCG TTGAGTGCAA
TGGCAAAAGC CTGCCTGACT GCGAGACTGA CAAGTCGAGC AGAGACGAAA GTCGGCCATA
GTGATCCGGT GGTCCCGAGT GGAAGGGCCA TCGCTCAACG GATAAAAGGT ACGCCGGGGA
TAACAGGCTG ATACTGCCCA AGAGTCCATA TCGACGGCAG TGTTTGGCAC CTCGATGTCG
GCTCATCTCA TCCTGGGGCT GGAGCAGGTC CCAAGGGTAC GGCTGTTCGC CGTTTAAAGA
GGTACGTGAG CTGGGTTTAG AACGTCGTGA GACAGTTCGG TCCCTATCTG CCGTGGGTGT
AGGATACTTG AGAGGAGTTG CCCCTAGTAC GAGAGGACCG GGGTGAACGA TCCACTGGTG
GACCTGTTAT CGTGCCAACG GTAGTGCAGG GTAGCTATGA TCGGAAAGGA TAACCGCTGA
AGGCATCTAA GCGGGAAGCC CCCCTCAAAA CAAGGTATCC CTGAGGGCCG TGGAAGACCA
CCACGTCAAT AGGCCGGAGA TGTAAGCGCA GCAATGCGTT CAGTTGACCG GTACTAATCG
CCCGATTGGC TTGATCTGAT CCAG
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| Protein sequence | |
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