| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3860 |
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| Symbol | |
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| ID | 4074923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008042 |
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| Strand | - |
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| Start bp | 112075 |
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| End bp | 112974 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638004517 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_611252 |
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| Protein GI | 99077993 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 56 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.680226 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAGCG GCCTCCGGCG GAGGTATTTG GGAAAAGATG AAGAAGGGGC GGATATGAGC
ATCCTTGTGT TTGGGGCAAC CGGGCAGGTG GCTCGGGAAT TGGCGCGTCA TGAGGGGGTG
ATCTCTGTGG GGCGGGAGCA GGCGGATCTG TCGGATCCTG GCGCCTGTGC TGCGCTCATT
CGCGAGACTG CGCCCGAGGC CGTGATCAAT GCCGCTGCCT ATACGGCGGT CGACAAGGCC
GAAACCGAGG AAGAGCTGGC CACCGTCATC AATGGCGCGG CCCCCGGGGC GATGGCGGCG
GCCTGCGTGC AGATGGGCAT TCCATTTGTC CATATCTCGA CCGATTATGT CTTTGCGGGC
ACTGGTGAGG CGCCCTGGCA GACGGATGAT CCGGTGGCGC CGCCCAATGC CTATGGCCGC
AGCAAGCGCG CCGGCGAAGA GGCGGTGATT GCGGCAGGCG GCACCTATGC GATTCTGCGC
ACCTCCTGGG TGGTCTCTGC CCATGGCAAT AATTTTGTAA AAACCATGCT GCGCCTTGGG
GCCGCGCGGG CGCAGGTGTC GGTGGTGGCG GACCAGATCG GCGCGCCCAC CCCTGCGCGC
GACATCGCAG AGGCCTGCCT CAAGATGGCG CGTCAGCTTG TGTTAGAGCC TAAAAAGTCC
GGCATCTACC ATTTTCAGGG CGCACCCTAT GTGAGCTGGG CGGGCTTTGC GGCAGAGATT
TTTGCCATCA GCAATCTGGC CTGCGAGGTT GTGGAGATCC CCACCACGGA CTATCCCACC
CCCGCTGTGC GGCCGCTGAA CTCCCGACTG GATTGCACCA CGTTAGAGAC TGTTTTTGGC
ATCCCGCAGC CCGATTGGCG CCGCGGGTTG CAGGATATTT TGAAGGAGCT CGCAGAGTGA
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| Protein sequence | MGSGLRRRYL GKDEEGADMS ILVFGATGQV ARELARHEGV ISVGREQADL SDPGACAALI
RETAPEAVIN AAAYTAVDKA ETEEELATVI NGAAPGAMAA ACVQMGIPFV HISTDYVFAG
TGEAPWQTDD PVAPPNAYGR SKRAGEEAVI AAGGTYAILR TSWVVSAHGN NFVKTMLRLG
AARAQVSVVA DQIGAPTPAR DIAEACLKMA RQLVLEPKKS GIYHFQGAPY VSWAGFAAEI
FAISNLACEV VEIPTTDYPT PAVRPLNSRL DCTTLETVFG IPQPDWRRGL QDILKELAE
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