| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3854 |
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| Symbol | |
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| ID | 4074917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008042 |
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| Strand | - |
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| Start bp | 106169 |
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| End bp | 107140 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638004511 |
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| Product | KpsF/GutQ family protein |
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| Protein accession | YP_611246 |
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| Protein GI | 99077987 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCGC GAGAACTGAC CTGTGATGAA ACCCTTGCCG AAATGGCCCG CGTGCTGACC
GTGGAGGCCG CCGCGCTGAC TCAGATGGCT TCTGAGGTGG GCGATCCACA GCTCAAGGCG
GTCGAGATTC TCGAGGCCAT GGAAGGCCGT GTGATCGTGT CGGGCGTCGG CAAATCCGGC
CATATCGGCA ATAAGATCGC CGCCACCCTG GCCTCGACGG GGACGCCTGC GCAATTTGTG
CATGCCACCG AGGCGAGCCA CGGCGATCTT GGCATGGTGA CGCCGCGCGA TGTCTGTCTG
GTGATCTCCA ATTCCGGCGA AACCTCCGAG CTGGCCGATA TCGTCACCTA TAGCCGCCGC
TTTGCTATTC CGCTCATTGC CATCACCCGC AAGGCCGACA GCACCCTCGC GACCCAGGCC
GATGTGGTGC TGCTGCTGCC CGATGCGCCC GAGGCCTGCG GCATCGGCAT GGCCCCCACC
ACCTCGACCA CGGCAACGCT GGCGATGGGG GATGCGCTGG CGGTGGCCCT GATGAAACGG
CGCGGCTTTG AGCGCGAGGA TTTCAAGGTC TTCCACCCCG GCGGCAAGCT CGGCGCGCAG
CTGATGCTGG TGGATGGGCT GATGCACACG GGCGAGGCGC TGCCGCTGGT GGCGCCAGAG
ACACCGATGA CAGAGGCGCT TTTGATCATG ACCGCCAAGG GCTTTGGCCT TGCGGGGCTG
GTCGAAGGTG GCCGCCTCAC GGGCATCATC ACCGACGGCG ATTTGCGCCG CAATATGGAT
GGTCTGATGG CGCGCAGCGC CGGCGAGGTG GCCACCCGCG GCCCCAAGGT GATCCGGCGC
GGTTCGCTGG CCTCCGAGGC GCTCCACGAC ATGAACAGCC GCAAGATCTC GGCGCTGTTT
GTGCTCGATA ATGAGGACCG GGTGGCGGGC TTGCTGCATA TCCATGACTG CCTGCGGGCT
GGGTTGGCTT GA
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| Protein sequence | MTPRELTCDE TLAEMARVLT VEAAALTQMA SEVGDPQLKA VEILEAMEGR VIVSGVGKSG
HIGNKIAATL ASTGTPAQFV HATEASHGDL GMVTPRDVCL VISNSGETSE LADIVTYSRR
FAIPLIAITR KADSTLATQA DVVLLLPDAP EACGIGMAPT TSTTATLAMG DALAVALMKR
RGFEREDFKV FHPGGKLGAQ LMLVDGLMHT GEALPLVAPE TPMTEALLIM TAKGFGLAGL
VEGGRLTGII TDGDLRRNMD GLMARSAGEV ATRGPKVIRR GSLASEALHD MNSRKISALF
VLDNEDRVAG LLHIHDCLRA GLA
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