Gene TM1040_3849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3849 
Symbol 
ID4074912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008042 
Strand
Start bp102308 
End bp102607 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content55% 
IMG OID638004506 
Producthypothetical protein 
Protein accessionYP_611241 
Protein GI99077982 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.562367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCGG CCAGCCGGTT CTTAAACTCG CACTCTAATC CTCCAAGGCT TTCAGCAGGG 
TGGGTTCTTA TACTTCCAGG CCTCCATACT CTTATTTCAG CTTGTAGAAG GTTGCGCTGC
TCAGGGCGTG GCCTCTGTGG TCGGCTTTCG TCTTCTCGCC CCTCGCTCAC CCTTTCTACT
TGTGCCTTGT TGAGCGGCTC TGTGAGGGCA GGCCAGTCAT GGCATGCGGT GCCTGCGGGT
AGAGGCATCC ACCGCGCATC CTTCAATTTC GAGTATGTGT TCTGGAAATT TGAGTTCTGA
 
Protein sequence
MAPASRFLNS HSNPPRLSAG WVLILPGLHT LISACRRLRC SGRGLCGRLS SSRPSLTLST 
CALLSGSVRA GQSWHAVPAG RGIHRASFNF EYVFWKFEF