| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3843 |
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| Symbol | |
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| ID | 4074906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008042 |
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| Strand | + |
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| Start bp | 90406 |
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| End bp | 92100 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638004500 |
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| Product | hypothetical protein |
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| Protein accession | YP_611235 |
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| Protein GI | 99077976 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.101575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAATG TTCTTCCGTT TGGAAAAAAA ACGCATTCCT CGCTTAGTGA GAACACTCAA
GACGTATTAG ACCTGAGCAC ACTGACGGAT GGCGCGGCGG ATTTCTCCAC CGGAATGGTT
GACCGGTCAT CAGGGGGCCT CTCACACCTC CCTAACCAAA CTGCAGTCAC ACCCGATTGG
GCCAATCAAG AAATTGCTAG CTTCATGCGA GCACATCGGT TGCTTGCCAT TGCGGGTCTC
TCCTTGGAAA CAGAGCGCGG AGTGACCGAC GAAGGTGACC CTTGGTTTGT TTTCGTAAAT
CAAGATGGAG ACGTATTCGC GCATTTCGCG CGCATCGGCG AAGTCTACAT CCTCGACAGT
ATTATTCAGC AGGAAATTAC AAAAGCCAGA AGCTTGGATG AACTGATTTC AGCCTTTGCA
GAAACCACTA CACCGGTGGA CAGTGTAGAC CACGCTTCAA CATCTGCCAC AGTTGTTCCC
TTCATCGCCT TGCGAGAATC AAAAGTACGT CTACACCCAG GCGCAACCTT GGCCGCTCTT
ATCTGGACAA TCTATATCCA GTCAGGAGAA CTTGCGGTCC CATCATTTAG TGCTGCGCTG
GATGTGACTG CAACGTCAAA GGCCGATGAA GTGACCACGC TACCCTCTCA AACCCGGGCC
TCCCCCTCGG AAGAGTTGGC TACGAGTACA TCTGAAGATA ATTCAGCAGA TCTCAAAAGT
ACTGAAAAGG ATACACACAC TCAAACGCCC TCAAGCGCTC AAGTGGCAGC GACATTTACT
ACCGTGCAGA CGGTTGGAAT GGGATTGAGC GCTATAGCCA TCTCGAATGG CATGTACTTT
TGGGTTTCAG GTGAGACCTT GCTCGAACAA GCGACACTGG CATCTCAGCT AGTCGCCGAA
GTAATCAAAG ATATATCTGA TGAAGAAACT GAGCAGCTTG CCGATCTGTC GGAGCTAGAT
AGCGTATTAT CCACAGTTCG CGCAGCGATA GAGGACAGTT CAGAGGCAAT GGCTTTGGCT
CAATCGCCAA TACGAGATAT TCCTACTGTC GACTTGGCAT CCATGCCGGC TATCGTTGCT
AACGCTGTTG AAAATGGAAA AGTTGGGAAC GCAATCAAAG CTAAAGACGT TCAAGGCGAC
GTAGCTTTTT CTGAAGAGAT GGATGGTGAG CTCATCAAGT TCCGGGATAT TCAGGCGAAC
CGCCCGGAGG AAATAGAGAC ATCTCAGATT CGCTCTACAC CAGTAGACAT TGAGAAAAAA
TATATTTTAC AAGAGCTTGA CGAGGTTGAG CACTTCTCGC TTACGTCCGA CGCTTTTAGC
AATATAGCTA CCCAGCTTTC TGACCTACCA TTCTTCACGC AAATGCTCAG CGGCTCATTC
CAAGCGGTCG TTGCCAGTGA GGGTTCTCAA ACTGTGCCCG CGTCAAGGCC CGACACCCTC
AATGATGCCT CCGAGACGGC ACCACGCTTC TCGATCTTTA ACGATGATGC GCACAATTTT
ATTGTATTCT TGATGAGTAA AGGGGATGAG ACCAAACGGT CTGACTACGA TAACGAAGTT
GTACTCTTTG ACTTTGATGC AATCGATAGT CAAACAGACG CGATCTATGC TCGTAGCTGG
TCCTTCGAAG ATGGATCTGT GATTTCTGCT GTAGGTTTAA AAAGCGACTT TGCTGCTTTT
GATCTTGTGA TCTAA
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| Protein sequence | MNNVLPFGKK THSSLSENTQ DVLDLSTLTD GAADFSTGMV DRSSGGLSHL PNQTAVTPDW
ANQEIASFMR AHRLLAIAGL SLETERGVTD EGDPWFVFVN QDGDVFAHFA RIGEVYILDS
IIQQEITKAR SLDELISAFA ETTTPVDSVD HASTSATVVP FIALRESKVR LHPGATLAAL
IWTIYIQSGE LAVPSFSAAL DVTATSKADE VTTLPSQTRA SPSEELATST SEDNSADLKS
TEKDTHTQTP SSAQVAATFT TVQTVGMGLS AIAISNGMYF WVSGETLLEQ ATLASQLVAE
VIKDISDEET EQLADLSELD SVLSTVRAAI EDSSEAMALA QSPIRDIPTV DLASMPAIVA
NAVENGKVGN AIKAKDVQGD VAFSEEMDGE LIKFRDIQAN RPEEIETSQI RSTPVDIEKK
YILQELDEVE HFSLTSDAFS NIATQLSDLP FFTQMLSGSF QAVVASEGSQ TVPASRPDTL
NDASETAPRF SIFNDDAHNF IVFLMSKGDE TKRSDYDNEV VLFDFDAIDS QTDAIYARSW
SFEDGSVISA VGLKSDFAAF DLVI
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