| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3841 |
|---|
| Symbol | |
|---|
| ID | 4074904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008042 |
|---|
| Strand | + |
|---|
| Start bp | 89417 |
|---|
| End bp | 89767 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 638004498 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_611233 |
|---|
| Protein GI | 99077974 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0399967 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTC CGGAGTCGTC AGGAACGGAT ACAGGCTTTT TGCTTCTACA GGCTTTTTGC
TTCGGGAGAA GCTGCGAAGT CTGCTGCGAT TGTGTTTGTG TCACGCCCTG CCTCAACCTG
ATCGATCCAG AACTGCAGGC CTGCAGGATC TGGAGCACGG TTGAAATATC CGACATAGAG
CGAGACGAGG AAATCTCTGT CTTCAGCACT GATTGCCATG GTCTATTTTC CTATACTCAT
TTCATAAAAC AGGAAACAGC ACAGCATGCC CCCCCCTGTC GCCATGCAGC CCACGCCTTT
AAGCCTCCAC ACTGCGAGCA CTGGGGTCGC AAGGGGAGAA TGAGGGCGTG A
|
|---|
| Protein sequence | MKRPESSGTD TGFLLLQAFC FGRSCEVCCD CVCVTPCLNL IDPELQACRI WSTVEISDIE
RDEEISVFST DCHGLFSYTH FIKQETAQHA PPCRHAAHAF KPPHCEHWGR KGRMRA
|
|---|
| |