| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3833 |
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| Symbol | |
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| ID | 4074983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008042 |
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| Strand | - |
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| Start bp | 78296 |
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| End bp | 79729 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638004491 |
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| Product | glycosyl transferase, group 1 |
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| Protein accession | YP_611226 |
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| Protein GI | 99077967 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.00330118 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.252696 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACCT ACTATTTTGA TATCACGGAT ATCGTTCTCT ACGTCAAAAA AGAAACGACA
ATATCTGGGA TACAGCGCGT TGCTCTGGAA GTTATTAGGC GTGCAGTAGG CAAGCTCGGA
TCTGAGCGCG TCAAGGTAGG CATGTGGGAC AAAGGTTCTC AAAGCTATCT GGCGATGGAT
GCCGATTTCC TTCTTGAACG GGAAGAATTT GACCCAGATT TTCTAGCTGC TGCTTTGCTG
GGGAAGGCTG TGCGCAAGGT GCAAACAGTA CCCAGTATTC TTACCCGGTA TCGCAACCAG
CGCGCGAAAT ACTTGTATCA TTGGCTGCGA GCTAACCTGG AAGAATACAA GCGAAACCAT
CGTTATTTTG AGCGACGCGG CACTACTTTA GAAGGCTGGG TGCTCGAGAA AGAAAGAGCC
CATAGAAACT CAAAGGAGCT GCCGGTTCTC GCGCCTGCAG CATCGGTACA AAAGCGGGTT
CCGCTCGAAG ACGTGGCGCA ATCAGGCGAC CGTCTGATTA TTTTAGGTGC GACTTGGGGG
CTGCAAGACC TCAACGACCA TCTTATTGAA TTAAAAGAGA AACTTGGAGT TGAAGTTGAT
CTCCTTATTC ACGATCTAAT CCCGCTGGTC GCGTCAGAAC ATCTTGCGGA TGATTTTTCT
GAGACATTCT ACCGCTGGCT GGAGGGATCT ACTCTCTATT GTTCGCGTTA TTTTGCAAAT
TCTCAGAACA CAGGGAAGGA TTTACGATGC TTCCTAAGCG AAATTAACTC CGACCTTCCA
ATCGATGTTG TGCCGTTGGC ACAAGCACTG GGAGATGGCC CTGCGGCCCT AGATACTCAA
AGCTTTAGAT CCAAACTGAA CGCGACAAAG GGTGTGCGCA GATCGTTTCT GAACATGACA
AAGGTACCGT ATGTTCTCGT TGTTGGTACG CTTGAAACAA GAAAGAATAT CTGGCGTTTA
GCTCAGGCCT GGCAGCAACT CATACAAGAT CCTCAAGTAG AACCTCCGCG CCTAATTTTT
GCGGGGAAGA AGGGGTGGTA CATCGATGAA TTTCTGGATT GGATGAAGGC GAGTGGAAAT
CTTGATGGCT GGATTAGTAT CGCGGATAGG CCGACTGACA AGGAATTAGC CTTCCTCTTC
CACAATTGCG TATTTACAGC AAACGTCTCC ACATATGAGG GATGGGGTTT GCCAGTGGGA
GAAGGCCTAA GCTTCGGCAA AACAGGTGTT GTCGCCGAAA ATTCCTCACT GACAGAGGTC
GGTGGAGACA TGGTCGAGTA CTGTGATGCT CATTCGATCA GTAGTATTCG AGACGCGTGT
AAGCGCTTGA TCATGGAAGA TGGTAGGCGA ACGGAGCTAG AGCAACGGAT TAAGAACACG
CAGTTACGTA GTTGGGATGA TGTGACCAAC GATTTGCTGG AGTACCTTAA CTAG
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| Protein sequence | MQTYYFDITD IVLYVKKETT ISGIQRVALE VIRRAVGKLG SERVKVGMWD KGSQSYLAMD
ADFLLEREEF DPDFLAAALL GKAVRKVQTV PSILTRYRNQ RAKYLYHWLR ANLEEYKRNH
RYFERRGTTL EGWVLEKERA HRNSKELPVL APAASVQKRV PLEDVAQSGD RLIILGATWG
LQDLNDHLIE LKEKLGVEVD LLIHDLIPLV ASEHLADDFS ETFYRWLEGS TLYCSRYFAN
SQNTGKDLRC FLSEINSDLP IDVVPLAQAL GDGPAALDTQ SFRSKLNATK GVRRSFLNMT
KVPYVLVVGT LETRKNIWRL AQAWQQLIQD PQVEPPRLIF AGKKGWYIDE FLDWMKASGN
LDGWISIADR PTDKELAFLF HNCVFTANVS TYEGWGLPVG EGLSFGKTGV VAENSSLTEV
GGDMVEYCDA HSISSIRDAC KRLIMEDGRR TELEQRIKNT QLRSWDDVTN DLLEYLN
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