Gene TM1040_3824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3824 
Symbol 
ID4074975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008042 
Strand
Start bp72319 
End bp72615 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content55% 
IMG OID638004483 
Producthypothetical protein 
Protein accessionYP_611218 
Protein GI99077959 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.196588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0660392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGAAA ACCTAAGGTT GTTTTTGTCG GCTATTGCAC GTCTATTAGC ATTTTTGATA 
CCCGCTATGG TTGCAGGCCA GGCCGGGTCT TGTCTCGCCC CTGTCCGGCC ATTCGTCCCA
AGCGATTCGC AAGCAAGCAG TGACTTCGCT GACATCATTC GGCGCGACTT TGAGGCCTAT
ATCAAGGACG TTCAGCAATA CTTCCACTGC CTCGAGCGGG AGCGTGCGCG TGCTTTTGAG
GAAGCCGGTG AAGTCAGTCA GGACTACGGT CGGTTCCTGG AGCTGGTGGG GGATTGA
 
Protein sequence
MIENLRLFLS AIARLLAFLI PAMVAGQAGS CLAPVRPFVP SDSQASSDFA DIIRRDFEAY 
IKDVQQYFHC LERERARAFE EAGEVSQDYG RFLELVGD