| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3810 |
|---|
| Symbol | |
|---|
| ID | 4074961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008042 |
|---|
| Strand | - |
|---|
| Start bp | 61761 |
|---|
| End bp | 62174 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638004469 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_611204 |
|---|
| Protein GI | 99077945 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 57 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.771581 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCAGG TGGGCTGTAC CCTCGTAGTG ACTGCGCTGG TCCTAGGCCT GACGTCGGCA
TCCGGCTTCG CTGAGCGCAA TCTGGTGCCG ACCCTCGAGC GCAGTTTCGA CGTCTGTTCA
GACCGGCCCG CCGAGCCCGT CTGGATGCAA GAAATCCCCC TGCGCCAAGC CTATCAACGC
GTGTTGGTCC AAGACATCTA CCGCGCCATG AACCTCGAGC GCATCGTCGA GACCGAAAGC
TGCGACTGTG AAACCCGCTT CCCCTCTTGG GACGCGGCCG AGGCGGAGTT TCATGAGCAG
CACGCGAGTG ACGAACGCTG GAAAATGCTG GAAGCATCCG ACGCCTACAA TCGGCGCGCC
AACGACGTTC GTCTCGAGGC TAAAGCCATC TGCGAAACCG CGGGCAATTG GTAA
|
|---|
| Protein sequence | MRQVGCTLVV TALVLGLTSA SGFAERNLVP TLERSFDVCS DRPAEPVWMQ EIPLRQAYQR
VLVQDIYRAM NLERIVETES CDCETRFPSW DAAEAEFHEQ HASDERWKML EASDAYNRRA
NDVRLEAKAI CETAGNW
|
|---|
| |