Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3805 |
Symbol | |
ID | 4074956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008042 |
Strand | + |
Start bp | 56625 |
End bp | 57533 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638004464 |
Product | hypothetical protein |
Protein accession | YP_611199 |
Protein GI | 99077940 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGATCGT TTTTGACAAA ATTCGGGGTC AGTCTGCTGT GCTCGGCGGG CATGGCGCAG GCCTTTTGCG ACGACATTCT GGCGACACAG GTGCTGTGTC TTACTGAGGA TGCAGATGAA ATCAAAGTCT GCAGCAGTCA GCACCCTGAA ATAGGAGATC CGGTTTTGGA ACTCCACGTG ACGCCTCAGA TCTCGGATGG CCCGATCTAT CGGCTTGCCG CCGATGTACC TTTCGGCATG GCGCCGGGTA CGGGTGGGTT CCCGTGGGAT GTGCATGAGT TTTCTTTCCT GCATGAGGGC GGGCGCGCTG TACTCAGTGT GAAAACACCC ATGGATACTG ACGACACCTC TGATGCGGAG ATTTGGCTGG ATCTGTTTGG ACGCGGAACC GCCCCAGATC GCAGCCTCTC TTGCATGCAA CCGGCCCTGA GTGCGGAAAT CGAAAACCTT TTGGCGTTGC GTCGTGTCTC AATGAATACC ATGCGCACGG GGCCAAGCGC CGATAGCGCT CCGTTCTACC AGCCGAGCAA GCCCATCTCC GGTGCCACGC CCCATGGCAG TTATAACTGT CGAGAAGTCG CCGGCGTGTT AAGCAATGAA GGCACCGAAA ACGGCCAGAT CGCGCTCTTT GCGGCACCAT CGGACGAGGC TGCGATCCTT GGCTATGCGT TTCCTTCCGA CCTCGGCTCC GCTTTTGAAT GCGTCTCAGA GGACGGCTTC TCTGGCATCA TCTGGGTAGA CCCCGACAAA GGCGACGGTG CCGGCGGCTA TATGACCCAG CTCGATTATG AGGCACGACT GGCTGCGTGC TCCATGACGG CCGATGATTG GCCGCAAGAC CGAGCATATT GGGGCAACTG CTCTAGCGCG TGGGTGAAAC AAGGCAATAT TGCCGGCTTT GGGGGCTAA
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Protein sequence | MRSFLTKFGV SLLCSAGMAQ AFCDDILATQ VLCLTEDADE IKVCSSQHPE IGDPVLELHV TPQISDGPIY RLAADVPFGM APGTGGFPWD VHEFSFLHEG GRAVLSVKTP MDTDDTSDAE IWLDLFGRGT APDRSLSCMQ PALSAEIENL LALRRVSMNT MRTGPSADSA PFYQPSKPIS GATPHGSYNC REVAGVLSNE GTENGQIALF AAPSDEAAIL GYAFPSDLGS AFECVSEDGF SGIIWVDPDK GDGAGGYMTQ LDYEARLAAC SMTADDWPQD RAYWGNCSSA WVKQGNIAGF GG
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