Gene TM1040_3805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3805 
Symbol 
ID4074956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008042 
Strand
Start bp56625 
End bp57533 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content58% 
IMG OID638004464 
Producthypothetical protein 
Protein accessionYP_611199 
Protein GI99077940 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGATCGT TTTTGACAAA ATTCGGGGTC AGTCTGCTGT GCTCGGCGGG CATGGCGCAG 
GCCTTTTGCG ACGACATTCT GGCGACACAG GTGCTGTGTC TTACTGAGGA TGCAGATGAA
ATCAAAGTCT GCAGCAGTCA GCACCCTGAA ATAGGAGATC CGGTTTTGGA ACTCCACGTG
ACGCCTCAGA TCTCGGATGG CCCGATCTAT CGGCTTGCCG CCGATGTACC TTTCGGCATG
GCGCCGGGTA CGGGTGGGTT CCCGTGGGAT GTGCATGAGT TTTCTTTCCT GCATGAGGGC
GGGCGCGCTG TACTCAGTGT GAAAACACCC ATGGATACTG ACGACACCTC TGATGCGGAG
ATTTGGCTGG ATCTGTTTGG ACGCGGAACC GCCCCAGATC GCAGCCTCTC TTGCATGCAA
CCGGCCCTGA GTGCGGAAAT CGAAAACCTT TTGGCGTTGC GTCGTGTCTC AATGAATACC
ATGCGCACGG GGCCAAGCGC CGATAGCGCT CCGTTCTACC AGCCGAGCAA GCCCATCTCC
GGTGCCACGC CCCATGGCAG TTATAACTGT CGAGAAGTCG CCGGCGTGTT AAGCAATGAA
GGCACCGAAA ACGGCCAGAT CGCGCTCTTT GCGGCACCAT CGGACGAGGC TGCGATCCTT
GGCTATGCGT TTCCTTCCGA CCTCGGCTCC GCTTTTGAAT GCGTCTCAGA GGACGGCTTC
TCTGGCATCA TCTGGGTAGA CCCCGACAAA GGCGACGGTG CCGGCGGCTA TATGACCCAG
CTCGATTATG AGGCACGACT GGCTGCGTGC TCCATGACGG CCGATGATTG GCCGCAAGAC
CGAGCATATT GGGGCAACTG CTCTAGCGCG TGGGTGAAAC AAGGCAATAT TGCCGGCTTT
GGGGGCTAA
 
Protein sequence
MRSFLTKFGV SLLCSAGMAQ AFCDDILATQ VLCLTEDADE IKVCSSQHPE IGDPVLELHV 
TPQISDGPIY RLAADVPFGM APGTGGFPWD VHEFSFLHEG GRAVLSVKTP MDTDDTSDAE
IWLDLFGRGT APDRSLSCMQ PALSAEIENL LALRRVSMNT MRTGPSADSA PFYQPSKPIS
GATPHGSYNC REVAGVLSNE GTENGQIALF AAPSDEAAIL GYAFPSDLGS AFECVSEDGF
SGIIWVDPDK GDGAGGYMTQ LDYEARLAAC SMTADDWPQD RAYWGNCSSA WVKQGNIAGF
GG