Gene TM1040_3804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3804 
Symbol 
ID4074955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008042 
Strand
Start bp56206 
End bp56622 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content59% 
IMG OID638004463 
Producthypothetical protein 
Protein accessionYP_611198 
Protein GI99077939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCGA AGTTGCTTTG TTTTTTGGCC TTTGCGCCTG TCGTTGGTCA TGCGGAGTGC 
CTGCCGCCTG AAACCCAGGC CCTATCATGC ACCTTGCCGA GTGGAGGGCA TCTGGAGCTT
TGCTGGACGC CGCAAAACGC CCGATTGGCA TTTGACAAGG AACCTGGCGT TCCCGCCGAG
GTCAGCGTTC CCTTGGGGAA TGTGACCGGC CTTACCGCCG CTGACTGGGC GTCCTCCACG
CTGCGCGGCG TGGGGGCGGG CTATGAAGTT TACGTATCCG GACAGGTTGC AGGCATGAAC
CTGATCCGGG ACGGCGGTGG AACCTCTTCA TATACCTGTG CAACCGGCAC AGTGAATGGA
TCGCTTGCGG AGCTGAACGA AGCGGCACTC TATGCCCCAG CCTCAAAGGA GAACTAA
 
Protein sequence
MRSKLLCFLA FAPVVGHAEC LPPETQALSC TLPSGGHLEL CWTPQNARLA FDKEPGVPAE 
VSVPLGNVTG LTAADWASST LRGVGAGYEV YVSGQVAGMN LIRDGGGTSS YTCATGTVNG
SLAELNEAAL YAPASKEN