Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3802 |
Symbol | |
ID | 4074953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008042 |
Strand | + |
Start bp | 54757 |
End bp | 55578 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638004461 |
Product | hypothetical protein |
Protein accession | YP_611196 |
Protein GI | 99077937 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 0.67495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCCAC GAACTCTGTC AGCGGCTGTC ATGATGATGA CGGCGACCGG GTGGTCCGGC ACAGCCAACG CGCAACCTGT TTGCGGCGGC GAGGTGCTGT TTCAATGTGC AACGGACAAC GCCGACTTTC GCGAGCAGAT TACCGTCTGC GCAAAGGATC ACAGCTATAT TCTGACACGT CACGCGTTGG CGTCGGGCGA AATGTACTAT GACACGCCGC TGATCGCCGA TGCGAATACA ACGTGGTTCA GCTGGTCCGA GGACGATCAG TTGCGGCTGG AAATCGGGTT CTGGAGCACC GACCTGGCAG AGCCCGTAAC CCTGCATGCG TCGCTGCCGT GGGACGACAT GGAGGAAACG CTTGCAGCGA CCGGCGAGTA CAGCATGTGG CTGCAATCAC CGCATTGGCG CGCGCAAGTC GATCAGACAT TATGCGCGCC GGAAACGATC TACGCCGACC CCGAGGCACT GTGGGGCGCC CAAGATACCC GCGGCCCGAT TGCCGCGTTC TTTTCCCAGG ATGAGATCAT CCCGCGCGTA AATACGGTAG GGGTGGCACG GGTGGCTGAC ACATCTGGCC ACCTCGAGGG CCTGCCGGTC TATGCCGCGG CACGCCCCTC GGCCGCAACC CCGATCTGGT GGATGCTACA GCCCGGCGAC ATCGTTGATA TCATTGATCG TGAAAATGAT TTCGTCGCCG TTGCCATCCC AACACTGGGC ATGACGGAAT GCTTCTTGCG GCCCGAAGCC CTTGGCCAGC CCTATAACGG GCCCTGTGCC ACAGGTTGGG TCGATGGCGC CTATCTTCAG CAAATACAAT AA
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Protein sequence | MLPRTLSAAV MMMTATGWSG TANAQPVCGG EVLFQCATDN ADFREQITVC AKDHSYILTR HALASGEMYY DTPLIADANT TWFSWSEDDQ LRLEIGFWST DLAEPVTLHA SLPWDDMEET LAATGEYSMW LQSPHWRAQV DQTLCAPETI YADPEALWGA QDTRGPIAAF FSQDEIIPRV NTVGVARVAD TSGHLEGLPV YAAARPSAAT PIWWMLQPGD IVDIIDREND FVAVAIPTLG MTECFLRPEA LGQPYNGPCA TGWVDGAYLQ QIQ
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