Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3770 |
Symbol | |
ID | 4074942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008042 |
Strand | + |
Start bp | 14155 |
End bp | 14565 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638004429 |
Product | hypothetical protein |
Protein accession | YP_611165 |
Protein GI | 99077906 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 0.0680365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCAAA CCGCCCACAT ATCTCTTCAG TCATCCAACA ATGTCAAAGA GCAAACACCC AAGACCCAAA AGCAGACCGT CGCGCAAATC TTAAGCGCCA CCGCCTACAT CCATACTCGA ATGCCCCAGT CTCTCCTGAG CGTCATAACC GTCTTTCCGA TCCGTCAGCA GCGTCTCCGC CGCGACCAAC CGCGCCTCAG CGCCGCCGGT GAAGCGCTGT TTATGGATAC ACGCAAAGAG TCGCAACCCC AAAAAACACC AACAACAAAC AAAAATGAAA AACTTCCCAA GCGCCCTGAT TTCAGCTCCT TAACCCAAGC TCCAAATCAG GATCACAGCG GCAAACATCC AACACCTAAA GAGGAAGGGC TGCTGATCCC CTGTCTGAGG AAGAGAGGCT CCGGAGAGTG A
|
Protein sequence | MNQTAHISLQ SSNNVKEQTP KTQKQTVAQI LSATAYIHTR MPQSLLSVIT VFPIRQQRLR RDQPRLSAAG EALFMDTRKE SQPQKTPTTN KNEKLPKRPD FSSLTQAPNQ DHSGKHPTPK EEGLLIPCLR KRGSGE
|
| |