Gene TM1040_3770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3770 
Symbol 
ID4074942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008042 
Strand
Start bp14155 
End bp14565 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content53% 
IMG OID638004429 
Producthypothetical protein 
Protein accessionYP_611165 
Protein GI99077906 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.0680365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAAA CCGCCCACAT ATCTCTTCAG TCATCCAACA ATGTCAAAGA GCAAACACCC 
AAGACCCAAA AGCAGACCGT CGCGCAAATC TTAAGCGCCA CCGCCTACAT CCATACTCGA
ATGCCCCAGT CTCTCCTGAG CGTCATAACC GTCTTTCCGA TCCGTCAGCA GCGTCTCCGC
CGCGACCAAC CGCGCCTCAG CGCCGCCGGT GAAGCGCTGT TTATGGATAC ACGCAAAGAG
TCGCAACCCC AAAAAACACC AACAACAAAC AAAAATGAAA AACTTCCCAA GCGCCCTGAT
TTCAGCTCCT TAACCCAAGC TCCAAATCAG GATCACAGCG GCAAACATCC AACACCTAAA
GAGGAAGGGC TGCTGATCCC CTGTCTGAGG AAGAGAGGCT CCGGAGAGTG A
 
Protein sequence
MNQTAHISLQ SSNNVKEQTP KTQKQTVAQI LSATAYIHTR MPQSLLSVIT VFPIRQQRLR 
RDQPRLSAAG EALFMDTRKE SQPQKTPTTN KNEKLPKRPD FSSLTQAPNQ DHSGKHPTPK
EEGLLIPCLR KRGSGE