Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_3214 |
Symbol | |
ID | 4074352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008036 |
Strand | + |
Start bp | 23364 |
End bp | 24275 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638004415 |
Product | hydrogenase accessory protein HypB |
Protein accession | YP_611146 |
Protein GI | 98152897 |
COG category | [K] Transcription [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCGGCA CCTGCGGATG CACCGATCCT GACAACGAGA TCGCGATGAT TGACCCGGAA ACCGGAAAGC GAGTGCTGCT TCGCAGCGGC GATGACCATT CCCACGATCA TGACCACTCC CACGATCATG ACCACTCCCA CGATCACACT CATTCACACG ATCATGATCA TTCACACGGG CACCATCATC ACCACCATCA TGATCACGGG CATGACCATC ACCACCACGG CGAACAAGCG GCGCGTGTAT CACTGGAAAC CGCCGTGCTT GACCGGAATG ATCGCCAGGC GGCTCGCAAC CGGGGCTGGT TCGAAGGGCG CGGTGTTGTC GCGCTCAATC TCGTCAGTTC GCCAGGGGCT GGCAAGACGA CCTTGCTCGA AACCACGATC CGGGCGCTGG AAGGAAGTCT GCCGATTGCC GTTATCGAGG GTGATCAACA GACGGCCAAT GACGCCACGC GCATTCGCGA AGCGGGGGCC CGTGCAATCC AGATCAACAC TGGGGCCGGC TGTCACCTCG AAGCCGATAT GGTTGCCCGC GCTGTTGAAG AACTCGCACC GAAATCCGGC TCGTTGCTGC TGATCGAGAA TGTCGGCAAT CTTGTTTGTC CGGCGATGTT CGATCTGGGT GAACGGATGA AGGTCGCCGT TATCTCCACC CCGGAGGGCG AGGACAAGCC ACTCAAATAC CCGCACATGT TCCGCGCAGC AGAGCTGGTG TTGATCAACA AGATCGACCT CGCCCCGCAT GTTGGATTCG ACGAGGCCGC ATGCCGTGCA AACATCTCCG CAGTAAACCC CAATGCGCTC GTCTTGCTGG TTTCCGCCCG CACCGGTGAA GGGATGGACG CGTGGTACGA TTTTCTGCGA GCAATGGCGT CAGCAGCCGC AGATGGCGGG TGCCTCATTT AG
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Protein sequence | MCGTCGCTDP DNEIAMIDPE TGKRVLLRSG DDHSHDHDHS HDHDHSHDHT HSHDHDHSHG HHHHHHHDHG HDHHHHGEQA ARVSLETAVL DRNDRQAARN RGWFEGRGVV ALNLVSSPGA GKTTLLETTI RALEGSLPIA VIEGDQQTAN DATRIREAGA RAIQINTGAG CHLEADMVAR AVEELAPKSG SLLLIENVGN LVCPAMFDLG ERMKVAVIST PEGEDKPLKY PHMFRAAELV LINKIDLAPH VGFDEAACRA NISAVNPNAL VLLVSARTGE GMDAWYDFLR AMASAAADGG CLI
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