| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3211 |
|---|
| Symbol | |
|---|
| ID | 4074349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008036 |
|---|
| Strand | + |
|---|
| Start bp | 21338 |
|---|
| End bp | 22387 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638004412 |
|---|
| Product | hydrogenase expression/formation protein HypE |
|---|
| Protein accession | YP_611143 |
|---|
| Protein GI | 98152894 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0309] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCTG TAACTCCCAC TGGCAACGGA CGGCTGCGAG CGGAGCGGGT GACGCTGGCG
CATGGCGGTG GCGGCAAGGC CATGCGGGAT CTGATCGAGG ATGTGTTTAC CTCGGTTTTC
GAACCCGACG GGTTGGAAGA CCAGGCGCGG TTGAGCCACG AAATGTTGGC CGTGGAGGGT
GCCCGGCTGG CCTTCACCAC GGACAGTTTC GTAGTGCAGC CGCTCGAGTT CCCCGGTGGC
GATATCGGCA AGATTGCGGT TTGCGGCACA GTTAACGACC TTACCGTCGG CGGCGCGCAA
CCGCTGTGGC TGTCGGCGGC CTTTATCATT GAGGAAGGCA CCGAAGTCGC CTTGCTACGC
CGCGTGGCAG CGGCCATGCG TAGGGCGGCC GACGAGGCCG GTGTGCGGAT CGTGACCGGC
GATACCAAGG TGGTTGAGCG CGGTGCTGCC GATACGCTTT TCGTCACCAC TTCCGGAGTG
GGAGTCATCC CTGCTGGACG CGAACTTGCC GCGGAGAAAG TTCGCGCGGG CGATGTCGCG
CTGGTCAACG GTGTATTGGG TGATCATGGC GCCGCCATTC TGGCCGCGCG TGGAGACATG
GCTTTCGAGG CGGATATTCG TTCGGATTGC CGCCCGCTCA ATCACCTGAT GGAAGCGGTG
ATCGAAGCCG CACCGGGTGT GCGCTGTGCG CGGGATGCCA CCAGAGGAGG CCTGGCCAGC
GCACTCAACG AAATATCGCA AGCCTCGGCC ATCGGGATCG AGATCGACGA GGCCAGATTG
CCAATGAGGG CCGAGGTCAA GGGCGTGTGC GAACTGCTCG GGCTTGATCC ACTCTATCTC
GCCAATGAAG GGGCGCTGGT GCTGTTCGTT CCAGAGGAGC AGGCGGAAGC TGCGCTGGCA
GCCATGCGCT CAACCGAGGC AGGGCGCGAT GCAGCCATTA TCGGGCGCGC GGCAGAGATG
CGCAGCCCGC GCGTGGTCAT GCATAGCCTG TTCGGCGGAA GCCGGATCGT CGACATGCTG
GTCGGCGAGC AACTGCCGCG TATCTGCTGA
|
|---|
| Protein sequence | MNAVTPTGNG RLRAERVTLA HGGGGKAMRD LIEDVFTSVF EPDGLEDQAR LSHEMLAVEG
ARLAFTTDSF VVQPLEFPGG DIGKIAVCGT VNDLTVGGAQ PLWLSAAFII EEGTEVALLR
RVAAAMRRAA DEAGVRIVTG DTKVVERGAA DTLFVTTSGV GVIPAGRELA AEKVRAGDVA
LVNGVLGDHG AAILAARGDM AFEADIRSDC RPLNHLMEAV IEAAPGVRCA RDATRGGLAS
ALNEISQASA IGIEIDEARL PMRAEVKGVC ELLGLDPLYL ANEGALVLFV PEEQAEAALA
AMRSTEAGRD AAIIGRAAEM RSPRVVMHSL FGGSRIVDML VGEQLPRIC
|
|---|
| |