| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3210 |
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| Symbol | |
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| ID | 4074348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008036 |
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| Strand | + |
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| Start bp | 20208 |
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| End bp | 21341 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638004411 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_611142 |
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| Protein GI | 98152893 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTATG TCGACGAATT CCGCGATCCG GTTCGCGCCG GTGTCCTGCT CAAGGAAATC
GAGGCCCTGA CTGCACAGAT CATGGCCGGG CGCGATCGCC CGGTCGTCAT CATGGAAGTG
TGCGGCGGCC ACACGCATTC GATCTTCCGA TACGGCATCG AGAAGATGCT TCCGCCGGAA
ATCGAGTTTG CCCATGGGCC GGGCTGTCCG GTTTGCGTGT TGCCGATGGG CCGGGTCGAT
GATTGCGTGG AACTGGCTAT GAAGCCGGAG GTGATCTTCA CTACGTTTGG TGATGCCATG
CGCGTGCCGG GATCGCGGCT CAGCCTGCTA GGCGCAAAGG CCGAAGGGGC CGATGTGCGG
ATGGTCTATT CACCACTCGA TGCCCTCGCG CTGGCCCGTG CGAACCCGGA CCGCGAAGTG
GTTTTCTTCG GCCTCGGCTT CGAGACGACG ATGCCCTCCA CAGCCCTGAC AATCCTGCAG
GCCCAGGCAG AAGGGATCGG CAATTTCTCG CTGTTCTGCA ACCACATCAC CATCATCCCC
ACGATCAAGG CGATCCTCGA TTCACCCGAT ATGGGGATCG ATGGCTTTCT CGGGCCGGGC
CATGTCTCGA TGGTCATCGG CACTGATCCC TATGACTTCA TCGCACGCGA CTACCACCGT
CCGCTGGTGG TCGCCGGCTT CGAACCGCTC GACGTATTGC ATTCGGTTTG GATGGTGCTT
CGGCAGATGG CCGAAGGCCG GGCGGAGATC GAAAACCAGT ATGACCGGAT TGTGCCACGC
CATGGCAATG AAGCTTCGCT GGCTGCGGTT ACGGAAGTAT TCGAACTGCG GGAATTCTTC
GAATGGCGCG GGCTGGGCTC GATTGACCAT TCTGGCGTCC AGATTCGCGA GGCCTATGCG
GCCTGGGATG CTGAGCGAAA ATTTGCCGTT GCATCGCCTA GCATTCCGGA TCCCAAGGCT
TGCCAGTGCG GCGAAGTGCT GAAAGGCGCG ATCAAGCCAT GGCAGTGCAA GCTGTTCGGT
CGGTCGTGCA CACCGGAAAC ACCGATGGGT GCCCTGATGG TTTCGTCTGA AGGAGCATGT
GCCGCCTATT ATCAGTATGG CGGGATCGAT GCGGTGCCGG AGCCAGCGCA ATGA
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| Protein sequence | MKYVDEFRDP VRAGVLLKEI EALTAQIMAG RDRPVVIMEV CGGHTHSIFR YGIEKMLPPE
IEFAHGPGCP VCVLPMGRVD DCVELAMKPE VIFTTFGDAM RVPGSRLSLL GAKAEGADVR
MVYSPLDALA LARANPDREV VFFGLGFETT MPSTALTILQ AQAEGIGNFS LFCNHITIIP
TIKAILDSPD MGIDGFLGPG HVSMVIGTDP YDFIARDYHR PLVVAGFEPL DVLHSVWMVL
RQMAEGRAEI ENQYDRIVPR HGNEASLAAV TEVFELREFF EWRGLGSIDH SGVQIREAYA
AWDAERKFAV ASPSIPDPKA CQCGEVLKGA IKPWQCKLFG RSCTPETPMG ALMVSSEGAC
AAYYQYGGID AVPEPAQ
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