Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_R0008 |
Symbol | |
ID | 4057694 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | + |
Start bp | 325852 |
End bp | 328741 |
Gene Length | 2890 bp |
Protein Length | |
Translation table | |
GC content | 58% |
IMG OID | 641229333 |
Product | 23S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.112108 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00656926 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GGTCAAGAGA ACAAGGGTCC ATGGTGGATG CCCTGGCACT GGAGCCGATG AAGGACGCGC TGACCTGCGA AAAGCCCCGA CGAGCCGGAG AGAGGCGTTG ACTCGGGGGT GTCCGAATGG GGAAACCCCC TCCGCAAGGA GGACTCCCGC AGGGGAGAGG GAACCCGGGG AACTGAAACA TCTCAGTACC CGGAGGAGCA GAAAGAGACA TCGATTCCCT GAGTAGCGGC GAGCGAAACG GGAACAGCCC AAACCAGGCC GCTTGCGGCC TGGGGTTGAA GGACCAGTCA TCCCAGATCC ACAACGCTGA CCCGAACACG CTGGAATGGC GTGACCACAG AGGGCGAACG TCCCGTAGGG AAACAGCCGC GTGGCTGGAC TGGCACCTGA GTAGGTCGTT GTTCGTGGAA CGATGACTGA ATCCGCGCGG ACCACCGCGC AAGGCTAAAT ACTCCCAGTG ACCGATAGCG CATAGTACCG TGAGGGAACG GTGAAAAGAA CCCCGGAAGG GGAGTGAAAG AGAACCTGAA ACCGTGGACT TACAAGCAGT CACGGCGCCA TACGCGCGTT GTGGCGTGCC TATTGAAGCA TGAGCCGGCG ACTTAGTCCT ACCTAGCGAG CTTAAGTCAC AGACGAAGGC GGAGCGAAAG CGAGTCCGAA CAGGGCGCTT GAGTTAGGTG GGCTAGACTC GAAACCAGGT GAGCTAGGCA TGACCAGGTT GAATCCCCCG TGACAGGGGG TGGAGGACCG AACCGGTGCC TGCTGAAACA GTCTCGGATG AGTTGTGTCT AGGAGTGAAA AGCTAACCGA ACCTGGAGAT AGCTAGTTCT CCCCGAAATG TATTGAGGTA CAGCCTCGGA TGATGAACGC GCCGTGTAGA GCACTGCTCA GGCTCGGGGG CCTACCAGCC TACCAACCCT TGGCAAACTC CGAAGCGACG CGGCTTTAGT CCGGGAGTGA GGCGGCGAGA GCTAACTTCC GTCGCCAAAA GGGAAACAAC CCAGACCGCC AGCTAAGGTC CCTAAATCCA TGCTCAGTGG TAAAGGATGT GCCGTTGCAC AGACAGCCAG GAGGTTGGCT TAGAAGCAGC CACCCTTCAA AGAGTGCGTA ATAGCTCACT GGTCGAGTGA CGGTGCGCCG AAAATGATCG GGGCTTAAGC ATGGTACCGA AGCTGCGGAT GCTCACGGTC CGTTTCCGGA CCGTGAGCGT GGTAGGGGAG CGTTCAGTTC GCAGCGAAGC TGGACCGCAA GGACCAGTGG AGCGAACTGA AGTGCGGATG CCGGCATGAG TAACGATAAA ACAGGTGAGA ATCCTGTTCG CCGTAAGGAC CAGGGTTCCT GGGGAAGGGT CGTCCGCCCA GGGAAAGTCG GGACCTAAGG TGAGGCCGAA AGGCGCAGCC GATGGACAGC AGGTCAAGAT TCCTGCACCC ACAACATGGA GTGATGGAGG GACGCATTAC GCTAACCAGA GCCGAGCTAT GGCGATGCCG GTTGGCAGAT CAAGGCTGTT CGGGTCAGAA AATCTACCGA ACACAGGGCT GAGGTCTGTC GGGAACCCCC TCGGGGGTGA AGCTGGTGAC GCGAGGGTGC CAAGAAAAGC TTCTAAACGT TGAAGTGTTG TGGCCCGTAC CGCAAACCGA CACAGGTGTC CGGGTGTCAA TGCACCAAGG CGCGCGAGAG AACCCTCGTT AAGGAACTTT GCAATCTCAC CCCGTAACTT CGGAAGAAGG GGTCCCGCTG AGAAGCGGGC GCAGTGAATA GGCCCAGGCG ACTGTTTACC AAAACCACAG CACTCTGCCA ACACGAAAAG TGGATGTATA GGGTGTGACG CCTGCCCGGT GCCGGAAGGT CAAAAGGAGG GGTGCAAGCT CCAAATTGAA GCCCCGGTGA ACGGCGGCCG TAACTATAAC GGTCCTAAGG TAGCGAAATT CCTTGTCGGG TAAGTTCCGA CCTGCACGAA AGGCGTAACG ATCTGGGCGC TGTCTCAACG AGGGACTCGG TGAAATTGAA TTGGCTGTAA AGATGCGGCC TACCCGTAGC AGGACGAAAA GACCCCGTGG AGCTTTACTC TAGTCTGACA TTGATATCCG AACTTGCCTG CGTAGCATAG GTGGGAGCCA ATGAAACCGG GCTCTTGGGC TCGGTGGAGG CAACGGTGAA ATACCACCCT GGAAAGTTTG GCTGTCTAAC CTGAAGATTC CCCTTCAGGA ACAGTGTTTG GCGGGGAGTT TGACTGGGGC GGTCGCCTCC GAAAAGGTAA CGGAGGCGCC CAAAGGTCAC CTCAAGACGG TTGGAAATCG TCTGCAGAGC GCAAAGGTAC AAGGTGGCTT GACTGCGACA CAGACAGGTG GAGCAGGGAC GAAAGTCGGG CTTAGTGAAC CGGTGGTACC GTGTGGAAGG GCCATCGATC AACGGATAAA AGTTACCCCG GGGATAACAG GCTGATCTCC CCCGAGAGTC CATATCGGCG GGGAGGTTTG GCACCTCGAT GTCGGCTCGT CGCATCCTGG GGCTGAAGAA GGTCCCAAGG GTTGGGCTGT TCGCCCATTA AAGCGGCACG CGAGCTGGGT TCAGAACGTC GTGAGACAGT TCGGTCTCTA TCCGCTACGG GCGTTGGATA TTTGAGGGGC GTTGCTCCTA GTACGAGAGG ACCGGAGTGA ACAGACCGCT GGTCTCCCTG CTGTCGTACC AACGGCATAC GCAGGGTAGC TACGTCTGGT CGGGATAACC GCTGAAAGCA TCTAAGCGGG AAGCCTTCCC CAAGATCAGA TATCCCACTC TCCTCGAAGA GGTAAGTCTC CCGGTAGACC ACCGGGTCAG AGGCCAGACG TGCACGCACG GCAACGTGCT GAGCGAACTG GTCCTCATCA GACGAGGTCT TGACCAGCTC
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Protein sequence | |
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