Gene Dgeo_2242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_2242 
Symbol 
ID4057210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp2365653 
End bp2366657 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content66% 
IMG OID641231289 
ProductUDP-glucose 4-epimerase 
Protein accessionYP_605705 
Protein GI94986341 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.558956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGA TGGTGGTGGG AGGGGCTGGC TACATCGGGT CGCATACCGT GCGGCAGCTG 
CGGCAGGCCG GATACGAGGT GGTGGTGTTC GACAACCTGT CGAGCGGGCA TGCGGCGGCC
CTGCCGCCCG AGGTGCCGCT GGTGCGCGGT GATCTGCTCG ACCTGGAGGC GGTGAAGGGG
GCACTGGAGG CGCACAAGCC CGATGCGGTG ATTCATTTCG CCGCGCTGAT CGAGGTCGGC
GAGAGTATGC GGGCGCCGGG GCGCTACTAC CGCAACAACG TGGTGGGCAG CCTGAACCTG
TTACAGGCCA TCGTGAAGAC ACGCAAGGTG CCGCTGGTCT TCAGTTCGAC TGCCGCCGTC
TACGGCACCA CCGATGCTGT GCCGATCCCC GAGGACGCGC CGCTCCACCC CGAGAGTGTC
TACGGCGAAA CGAAGCTGAT GACAGAGCGC ATGATCCACG CCTTCCATGT GGCGCACGGC
CTACCCTACA TCATCCTGCG GTACTTCAAC GTGTGCGGCG CGGCCCCGGA TGGCCAGATC
GGGGAGGCCC ATCCCCACAA GACGCACCTG ATCGAACTGG CCTGCCTGAC CGCCCTGGGC
CAGCGCGAGC AGATGATGAT CTTCGGTGCT GACTATCCCA CCCCCGACGG CACCTGCATC
CGCGATTACA TCCACGTGCT CGACCTGGCC GACGCGCACG TCCTGGCTGT GCAGGCTCTG
GCACAAGGCC AGCGGGACGC CGCCACCTAC AATGTTGGCC TGGGCTACGG CTTCAGTGTG
CTGCAGGTGC TTGACGCGGT GGACGCGGTG ATTGCTGAAG ACGGCCTCCC GCCCCTGAAA
CGCGAGATTG CCCCCCGCCG CCCCGGTGAT CCCCCACGGT TGGTTGCGGA TGCCCGCCGC
ATCGTGGAGG AGCTGGGGTT CAAGCCGCAG TTGACTGAGC TCAAGGAGAT CGTGCGGACA
GCCTGGGAAT GGCACCGGAA ACATCCGCAG GGGTATGAGG CCTAG
 
Protein sequence
MKLMVVGGAG YIGSHTVRQL RQAGYEVVVF DNLSSGHAAA LPPEVPLVRG DLLDLEAVKG 
ALEAHKPDAV IHFAALIEVG ESMRAPGRYY RNNVVGSLNL LQAIVKTRKV PLVFSSTAAV
YGTTDAVPIP EDAPLHPESV YGETKLMTER MIHAFHVAHG LPYIILRYFN VCGAAPDGQI
GEAHPHKTHL IELACLTALG QREQMMIFGA DYPTPDGTCI RDYIHVLDLA DAHVLAVQAL
AQGQRDAATY NVGLGYGFSV LQVLDAVDAV IAEDGLPPLK REIAPRRPGD PPRLVADARR
IVEELGFKPQ LTELKEIVRT AWEWHRKHPQ GYEA