Gene Dgeo_2219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_2219 
Symbol 
ID4056894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp2338322 
End bp2339086 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content65% 
IMG OID641231262 
Productpeptidylprolyl isomerase 
Protein accessionYP_605682 
Protein GI94986318 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGG CCGCCCTGCT CCTGACCGTT CTGCTCGCCC TGACCGCCTG CCAGAAAAAG 
GACGCCGCAG CGACCAGCCA AACGGAGACT GCCACGACCG ACACCAAGAC CGATACCGGC
ACCGACGCGG CCAAGACCGC CGAGGTCACG GCGCCCGGCC CCATTCCGGC GGGCTACACC
CTGGTGCCGT TCCTGACCGA CCAGCCGGTG CGCGCCTTCA AGGCTGAACC CGCTATGACG
CTGCAGGCGG GCAAGGACTA CTACGCCCTG ATCGACACCA ACCGGGGCCA GATTCTCGCC
GACCTCTACG AGCAGGAGAC GCCCGTCACG GTCAACAACT TCGTGACGCT GGCCCGCAAC
CACTTCTACG ACGGCCTGCG CTTTCACCGG GTCATCGACG GCTTCATGGC CCAGACTGGT
GATCCCAAGA GCGCGGACGA GGCGAAGAAG GCCGAGTGGG GCACCGGCGG CCCCGGCTAC
CAGTTCGCCG ACGAGTTTCG CAGCAAGCTC ACCTTTGACA GTCCCGGGAT TCTGGCCATG
GCCAATAGCG GCCCCGCCAC CAACGGCTCG CAGTTTTTCA TCACCTTCGC CCCCACCGAC
TTTCTGAATG GCCGCCACAC CATCTTCGGC AAGGTGATCA GCGGCGACGA CGTGCTGGAC
AAACTCACCC GCACCAGCGA CACCAGCAGT GGCTCGGAAA CCCCAATCCC CGGCGCCGTC
CCCGACAAGA TCCTGACGGT GCGGATCCTG ACCAAGGGGA GCTGA
 
Protein sequence
MKQAALLLTV LLALTACQKK DAAATSQTET ATTDTKTDTG TDAAKTAEVT APGPIPAGYT 
LVPFLTDQPV RAFKAEPAMT LQAGKDYYAL IDTNRGQILA DLYEQETPVT VNNFVTLARN
HFYDGLRFHR VIDGFMAQTG DPKSADEAKK AEWGTGGPGY QFADEFRSKL TFDSPGILAM
ANSGPATNGS QFFITFAPTD FLNGRHTIFG KVISGDDVLD KLTRTSDTSS GSETPIPGAV
PDKILTVRIL TKGS