| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2166 |
|---|
| Symbol | |
|---|
| ID | 4058901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | + |
|---|
| Start bp | 2282472 |
|---|
| End bp | 2283332 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641231207 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_605629 |
|---|
| Protein GI | 94986265 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACCACCT TCCTGCAACA ACTCTTCAAC GCGCTGGCAC TGGGCGGGGT GTATGCACTC
GTCGCACTGG GGCTGACGCT GGTGTACGGC GTGATGCGCG TGCCCAACTT CGCGCACGGC
GGCCTGTACA TGCTGGGCGC CTACTTCACC TACGCGATCC TGACTGGACT CGGCGTTGGC
TACGTGCCCG CACTGCTGCT GGCCGCTGTG GGCGTGGCCC TGCTGGCCGC GCTGCTCGAA
CGGGTGGTGT TCTATCCACT GCGAGGCGCA CCGCACGTCC ACGCCATGAT CGCGGCGATC
GGCGTGCTGT TTTTTCTGGA GGCCGCCGTG CAATTGATCT GGGGGCCGGA CTTCAAGCAG
ATTCCTGAGC CCGTACCGGG CATCCTGAAC CTGGGCGGCG TGGTGATCAC CTGGCAACGC
CTGATCGTGA TCGTGGCCTC ACTGCTGGTG ATGCTGGGGT TGAACTTCTT CCTGAAGCGC
ACGCTGACGG GGGCCACCAT CGAGGCGATG AGCCAGAACC GCGAGGGCGC GCGGCTGGTG
GGCATCAACG TGAACCGGGT GGGCATGCTG ACCTTCGCCA TCTCCGGAGC GCTCGCCGCC
GTCGCCGCCG CCCTGATCGC GCCCATCATC TCGGTGGCTC CCTCCATGGG TGAGGTGATG
AACCTCAAGG TCTTCGCCAT CATCATTCTG GGCGGGATGG GCAGTGTGCC GGGGGCCATC
GTGGGGGCTT TTCTGCTGGC CTTTGCGGAA GTGTTCGGCG GCTTCTACAT CAACCTCGAT
TTCGCAGACG TGATCGGCTT CGCGGTGCTG GTGCTGGTGC TGGCGATCCG GCCCGAGGGC
TTATTTCGGA GGGGAACGTG A
|
|---|
| Protein sequence | MTTFLQQLFN ALALGGVYAL VALGLTLVYG VMRVPNFAHG GLYMLGAYFT YAILTGLGVG
YVPALLLAAV GVALLAALLE RVVFYPLRGA PHVHAMIAAI GVLFFLEAAV QLIWGPDFKQ
IPEPVPGILN LGGVVITWQR LIVIVASLLV MLGLNFFLKR TLTGATIEAM SQNREGARLV
GINVNRVGML TFAISGALAA VAAALIAPII SVAPSMGEVM NLKVFAIIIL GGMGSVPGAI
VGAFLLAFAE VFGGFYINLD FADVIGFAVL VLVLAIRPEG LFRRGT
|
|---|
| |