Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_2144 |
Symbol | |
ID | 4058879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | + |
Start bp | 2256797 |
End bp | 2257366 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641231184 |
Product | HNH endonuclease |
Protein accession | YP_605607 |
Protein GI | 94986243 |
COG category | [V] Defense mechanisms |
COG ID | [COG1403] Restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTTG TGAATCCCCG AGCGAGCGTG ACGAGAGAGG AGGCGCGCGG AATGCGCGTG GCGCCGGACC TCAACGCACC GCGCGTGCTG GTCCTGAACG CGTCGTACGA ACCCTTGCAC GTGACCAGCG CCAAACGCGC GATCACTCTG CTTCAGTATG GCGTGGCCGA GGTGCTGGAG GTCAGTGAAG ACGTGGTCCG CTCGCCCAGT ACCGTCCTGC TCGTCCCGAG CGTGATTCGG CTGAAGCGCT ATGTCCGGCG CCCGCGCGTG CATCCGGTGC CCTTCAACCG CCGCAACGTG CTGAGGCGCG ATACCTTTGC CTGCCAGTAC TGCGGCGCGG AAACGGATCT CACCCTCGAC CACGTGCTGC CACGTTCGCG TGGAGGGCGA CACAGCTGGG AAAATGTGGT GACGGCCTGC CGAACCTGCA ACCAGCGCAA GGGGAACCGC ACCCCTGACG AGGCCGGGAT GCCACTGCGC TCCCGGCCTC GCGCGCCTAC ATTTGGGGTA TATGCCCACG GCCAGTTTGC CCACTGGCAA CCGGAATGGG CGCGGTACAT CGGAGGCTAG
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Protein sequence | MPLVNPRASV TREEARGMRV APDLNAPRVL VLNASYEPLH VTSAKRAITL LQYGVAEVLE VSEDVVRSPS TVLLVPSVIR LKRYVRRPRV HPVPFNRRNV LRRDTFACQY CGAETDLTLD HVLPRSRGGR HSWENVVTAC RTCNQRKGNR TPDEAGMPLR SRPRAPTFGV YAHGQFAHWQ PEWARYIGG
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