| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2122 |
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| Symbol | |
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| ID | 4058857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | + |
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| Start bp | 2234162 |
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| End bp | 2235883 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641231162 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_605585 |
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| Protein GI | 94986221 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.973923 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TTGCTCTGCT CAGCACCCTT CTTCTCGCTG GCGCGGCCTT TGCCGCTGCC
CCCAAAGACA CGCTGGTGGT CCAGCAGGCT GCCGATATCC CCACCCTTGA CCCCGGCGCG
ACCTACGACA CCGCCTCGGG TTCAGTGGTG GAGAACATCT ACGAGACGCT GGTGACCTAC
AAGGGGAGTA GCCTGCGTGA CCTGGAGCCG CTGCTGGCCA CCAAGTGGAC CATCAGCAAT
GGTGGCAAGA CCTACACCTT TGATCTGCGC AAGAACGTCA AGTTCCACTC CGGGAATCCC
TTCACCTGCG CTGACGCCGA GTACACCTTC GAGCGCAACC TGGTCACCAA CTCTGCCGAG
TCGGGCAATT GGTTCCTGGC TGAGAGCCTG CTGGGCACCG GCAGCAACGC CAACGATGAC
AAGTCGATCA CCTGGTCCAA GATCGACAGG GCGGTCGAGT GTAACAATCA GGGCCAACTC
GTCTTTAACC TGCCCAAGCC CGACCCGGCC TTCCTCGCCA AGCTGGCCTT CCCGGGTCAG
AGCATTGTGG ACAAGAACTG GGCCATCAAG CTTGGAGAGT GGAGCGGCAA AGAGGCTGAC
TGGAAGAGCT GGGTGGGCAA GGATCTCCAG GGCAGCAAGC TGAATGCTCA ACCCAGCGGC
ACCGGCGCCT ACCGTCTGGT GCGCAAGGAC GCCAATGCCA CGCTGGCCCA GGCCTTCGAC
GGCTACTGGG GCAAGAAGCC TGCCATCAAG AATGTGATTC TTCAGAAGGT GCCCGAACTG
GCTGCCCGCC AGCAGGCCTT CTTGCGCGGT GACGCCGATC TGATTGAGGC GGGTACCCGC
GCCAACGTTG AAGAGCAGCT CAAGGGCAAG CCCGGTGTGG TGGTCGTGGA CGGCCTGCCC
AACACCACGG CGACGGCGAT CTTCATGAAC GAGAACATCA AGGATCCTGC GCGCCTGGGC
AGCGGCAAGC TGGACGGCCA GGGGATTCCC GCCAACTTCT TCAGCGACGT CAACGTGCGG
CGCGGGTTCT CCTATGCCTT CAACTACGCC CAGTACATCA GTGATGTGCT GAAGGGCAAG
GGCAAGCAGC GCACCATGCT GCTCCCCGAC TCCTTCCCCG GCTATGACGC TAAGGTCAAG
ACCTACAAGT ACGACCCAGC GCAGGCCAAG GCCTACTTCC AGCGCGCCTG GGGCGGCCAG
CTCTGGAAAA ATGGCTTTAC CCTGAATGTG GCGTACCGCG CGGGGAGTGT GGGCGCGCAG
ACTGCGATGG AAATTCTGAA GAAGAACATC GAGTCTCTCA ATCCCAAGTT CCGCGTGAAC
ATCCAGGCCA AGGAGTGGTC GGCCATGCTG AATGACTCCA AGGCAGGGAA GGAGCCGATG
ATCATTCTCG GCTGGGCGCC GGACTACGCG GACCCCGACA ACTTCATGTA CACCTTCTAC
TCCAGCAACG GGTACTACTA CCCCCGCAGC AATTGGAAGG ACGCGACCGT TGACAAGTGG
CTGGAGCAGG CCCGCAACAC CACCAACACG GCCGAGCGTA ACCGCCTCTA CAGCCTGGTG
GGTCAGCGCG CCTACGAGCA GGCGCCCTTT ATCCTGGTGC CGGCGGGCGT CGGCTTGAAC
GTGCAGCGCA GCAATCTGGT CGGCGCAACG GCGCAGACCT TCAACCCCAT GATCTCGTTC
AGCTACACCG GGACCTTCTG GAAGGATCTC AGCAAGAAGT AA
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| Protein sequence | MKKIALLSTL LLAGAAFAAA PKDTLVVQQA ADIPTLDPGA TYDTASGSVV ENIYETLVTY
KGSSLRDLEP LLATKWTISN GGKTYTFDLR KNVKFHSGNP FTCADAEYTF ERNLVTNSAE
SGNWFLAESL LGTGSNANDD KSITWSKIDR AVECNNQGQL VFNLPKPDPA FLAKLAFPGQ
SIVDKNWAIK LGEWSGKEAD WKSWVGKDLQ GSKLNAQPSG TGAYRLVRKD ANATLAQAFD
GYWGKKPAIK NVILQKVPEL AARQQAFLRG DADLIEAGTR ANVEEQLKGK PGVVVVDGLP
NTTATAIFMN ENIKDPARLG SGKLDGQGIP ANFFSDVNVR RGFSYAFNYA QYISDVLKGK
GKQRTMLLPD SFPGYDAKVK TYKYDPAQAK AYFQRAWGGQ LWKNGFTLNV AYRAGSVGAQ
TAMEILKKNI ESLNPKFRVN IQAKEWSAML NDSKAGKEPM IILGWAPDYA DPDNFMYTFY
SSNGYYYPRS NWKDATVDKW LEQARNTTNT AERNRLYSLV GQRAYEQAPF ILVPAGVGLN
VQRSNLVGAT AQTFNPMISF SYTGTFWKDL SKK
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