Gene Dgeo_2097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_2097 
Symbol 
ID4058194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp2207310 
End bp2208440 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content64% 
IMG OID641231136 
Producthypothetical protein 
Protein accessionYP_605560 
Protein GI94986196 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 
TIGRFAM ID[TIGR00423] radical SAM domain protein, CofH subfamily 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0332172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTGGC TGCGCGACCA GGCTCTGGCC CCCATCGTGG AGAAAGTGGA AGCGGGCGAG 
CGCCTGAGCT TTGACGAGGG GATGCGGCTC TACCACACCC GCGACCTGAA CGCGCTGATG
CGCCTGGCGA ACCAGACCAA GATGCGGCTG CACGGAGACA AGGTGTACTT CGTCCACTCC
ATGCGGCTTG AATTCACCAA TATCTGCTAC GTGGGCTGCA CCTTCTGCGC CTTTGCCGCG
CGCAAGGGCG AGGACCGCGC CTGGGACTAT TCCCCAGAAG AAGTGGTCGA GCAGGTGCGG
CGCCGTTACC TTCCCGGCAT CACCGAACTC CACATGAGTA GTGGGCACCA TCCCAACCAC
CCGTGGGCCT ATTACCCCGA GATGGTGCGG CGGCTGCGGG CAGCTTTCCC CGACCTGCAG
GTCAAGGCCT TCACGGCGGC GGAGATCGAA CACCTGTCGC GAATCAGCAA GATGCCTACC
CTGGATGTCC TGCGTGAGCT TCAGGCGGCG GGCCTCGCGG CAATGCCAGG TGGCGGGGCG
GAAATCTTCG CGGACCGGGT GCGGCGCCAG GTGGCGAAGA ATAAGGTGAA GGCGGAAAAG
TGGCTCCAGA TTCACCGTGA GGCGCATTCG CTGGGCATGC GGACAAACGC CACCATGCTC
TACGGCCATA TCGAGACGCT GGAAGAACGG CTGGACCACC TGCACCGGCT GCGGGAGTTG
CAAGACGAGA CGGGCGGCTT TCACGCCTTC ATCCCCCTTG CCTTTCAGCC GCTCGGGAAC
ACGCTCGCGC AGAACCTCGG CAAGACCGAG TTCACGACCG GGCTCGACGA TCTGCGAAAT
CTCGCAGTGG CCCGCGTGTA CCTCGACAAC TTCCCGCACA TCAAGGGCTA CTGGGTGATG
ATCGGCTCGG AGCTGACGCA GGTCAGCCTG GACTGGGGCG TCAGCGATAT CGACGGCACC
ATTCAGGAAG AACACATTGC GCACGCCGCA GGGGCGACCT CCCCGATGGC GCTCTCGCAG
GCGGGCATGG TGAGGATGAT CCAGCAAGCC GGGCGCGTGC CGGTGCTGCG CGACGCCTAC
TATCACGAGC TGGAGGTCTT CCCCCGGCTG GGCGCGGAGG CGGCGGACTA G
 
Protein sequence
MKWLRDQALA PIVEKVEAGE RLSFDEGMRL YHTRDLNALM RLANQTKMRL HGDKVYFVHS 
MRLEFTNICY VGCTFCAFAA RKGEDRAWDY SPEEVVEQVR RRYLPGITEL HMSSGHHPNH
PWAYYPEMVR RLRAAFPDLQ VKAFTAAEIE HLSRISKMPT LDVLRELQAA GLAAMPGGGA
EIFADRVRRQ VAKNKVKAEK WLQIHREAHS LGMRTNATML YGHIETLEER LDHLHRLREL
QDETGGFHAF IPLAFQPLGN TLAQNLGKTE FTTGLDDLRN LAVARVYLDN FPHIKGYWVM
IGSELTQVSL DWGVSDIDGT IQEEHIAHAA GATSPMALSQ AGMVRMIQQA GRVPVLRDAY
YHELEVFPRL GAEAAD