Gene Dgeo_2076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_2076 
SymboldnaK 
ID4058173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp2186109 
End bp2187998 
Gene Length1890 bp 
Protein Length629 aa 
Translation table11 
GC content65% 
IMG OID641231115 
Productmolecular chaperone DnaK 
Protein accessionYP_605539 
Protein GI94986175 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID[TIGR02350] chaperone protein DnaK 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000834222 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAAG CTGTCGGAAT CGACCTCGGA ACCACCAACA GCGTGATCGC CACGATGGAA 
GGCGGACGCC CAGAAGTGAT CGTGAATGCG GAAGGGGCGC GTACCACCCC CTCCGTTGTC
GCGTACAAGG GGGACGAGCG CCTGGTCGGG CAGATCGCCC GCCGTCAGGC CGCGCTGAAC
CCCAAGGCCA CCCTGTTCGA AGTCAAGCGT TTTATCGGTC GCCGCTGGGA TGAGGTCAAG
GAAGAGGCCG CCCGCATGCC CTTTACGGTG AAGGAAGGCC CGGGCGGGTC TGTGCGCATC
GAGGTGAATG GCAAGGACCT CGCCCCGGAG CAGGTGAGCG CCGAGGTGCT GCGCAAGCTG
GTTGCGGACG CCAGCGCCAA GCTGGGCGAA AAGATCACCG ACGCCGTGAT CACCGTGCCC
GCCTACTTCG ACAACTCGCA GCGCGAGGCC ACCAAGCAGG CGGGTGAGAT CGCAGGCTTG
AACGTGCTGC GTGTGATCAA CGAGCCGACT GCCGCGGCGC TGGCCTACGG CCTGGAGCGC
AAGGGCAACG AGACGGTGCT GGTCTTTGAC CTGGGTGGCG GCACCTTTGA CGTGACCATC
CTGGAACTGG GCGAGGGTGT CTTCGAGGTG CGTTCGACCG CCGGTGACAC GCACCTGGGC
GGCGCGGACT TTGACCAGCG CATCGTGAAC TGGCTGGCCG AGGAATTCAG GAAGGAGCAC
AACTTCGACC TGCGCAAGGA TCCGCAGGCC CTCCAGCGCC TGATCGAGGC TGCCGAGCGC
GCCAAGATCG AACTCAGCAA CGCCTCCGAG ACCACCATCA GCCTTCCTTT CATCACCTTT
GACCCCGAGA CGCGCACGCC CCTGCACCTG GAGCGTACCC TGAGCCGCGC GAAGTTCGAA
GAACTCACCG CCGACCTGCT GAGGCGCGTA CGTCAGCCCG TCGAGCAGGC GCTTGCCGAC
GCCAAGCTGA GCGCCAGCGA TATCGACGAG GTGATTCTGG TGGGCGGCTC CACCCGTATC
CCCGCGGTCA AGCGCATCGT GAAGGAGATC ACCGGCAAGG AGCCCAACGA GTCGGTCAAC
CCCGACGAGG CGGTCGCGCT GGGGGCCGCG GTGCAGGCGG GCATCATTCA GGGTGACGCC
AACCTGGGTG ACATCGTGCT GGTCGACGTC ACGCCCCTCA CGCTGGGGGT GGAGGTCAAG
GGCGGGATGG TCGCGCCGAT GATTCCCCGC AACACCACCA TCCCCGCCAA GAAGACCGAG
ATCTACACCA CCGCCGAGAA CAACCAGCCG GGCGTAGAGA TCGTGGTGCT CCAGGGCGAG
CGTCCCATGG CCGCCGACAA CAAGTCCCTG GGCCGCTTCA AGCTCGAAGG CATCCCGCCG
ATGCCCGCTG GACGGCCGCA GATCGAGGTC ACCTTTGACA TCGACGCGAA CGGCATCCTG
CACGTCACGG CCAAGGAAAA GACCAGCGGC AAGGAAGCCA GCATCCGCAT CGAGAACACC
ACCACCCTCG ACAAGAGCGA CGTGGAACGG ATGGTGAAGG AAGCCGAGCA GAACGCCGAA
GCCGACCGCA AGCGCCGCGA GCGGGTCGAG AAGCGCAACA ATCTCGACAG CCTGCGTGTG
CAGGCCCTGG GCCAGCTCGA GGAGAACCAG AGCGCACCCC AAGACGCCAA GGACCGCCTG
AAGGCGGCTG CCGACGAGGC TGAGGAGGCA GTGCGCAGTG ACGACGACAG CCGGATCGAG
CGCGCCCAAA AGCAGCTCGA AGAGGCCATG CGGTCCTTCA TGACCGCAGC GCAAAGTGGC
AGCCAGAACC AGGCCGGTCA AGGCGCCCAG ACCCAGACAG GCCGCCAGGA AGACGACGTG
ATCGACGCCG ACTTCAAGCC CGCTGAGTAA
 
Protein sequence
MPKAVGIDLG TTNSVIATME GGRPEVIVNA EGARTTPSVV AYKGDERLVG QIARRQAALN 
PKATLFEVKR FIGRRWDEVK EEAARMPFTV KEGPGGSVRI EVNGKDLAPE QVSAEVLRKL
VADASAKLGE KITDAVITVP AYFDNSQREA TKQAGEIAGL NVLRVINEPT AAALAYGLER
KGNETVLVFD LGGGTFDVTI LELGEGVFEV RSTAGDTHLG GADFDQRIVN WLAEEFRKEH
NFDLRKDPQA LQRLIEAAER AKIELSNASE TTISLPFITF DPETRTPLHL ERTLSRAKFE
ELTADLLRRV RQPVEQALAD AKLSASDIDE VILVGGSTRI PAVKRIVKEI TGKEPNESVN
PDEAVALGAA VQAGIIQGDA NLGDIVLVDV TPLTLGVEVK GGMVAPMIPR NTTIPAKKTE
IYTTAENNQP GVEIVVLQGE RPMAADNKSL GRFKLEGIPP MPAGRPQIEV TFDIDANGIL
HVTAKEKTSG KEASIRIENT TTLDKSDVER MVKEAEQNAE ADRKRRERVE KRNNLDSLRV
QALGQLEENQ SAPQDAKDRL KAAADEAEEA VRSDDDSRIE RAQKQLEEAM RSFMTAAQSG
SQNQAGQGAQ TQTGRQEDDV IDADFKPAE