Gene Dgeo_2045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_2045 
Symbol 
ID4058391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp2152033 
End bp2152701 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content63% 
IMG OID641231084 
ProductV-type ATPase, D subunit 
Protein accessionYP_605508 
Protein GI94986144 
COG category[C] Energy production and conversion 
COG ID[COG1394] Archaeal/vacuolar-type H+-ATPase subunit D 
TIGRFAM ID[TIGR00309] H(+)-transporting ATP synthase, vacuolar type, subunit D 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGAC AGATCAGTCC CACCCGCAGT GCCCTCCTGG CCAGCAAGGC CAGCCTCAAG 
ACGGCAACCA GCGGCGCAGA CCTGCTGAAA CGCAAGCGGG ACGCGCTGAT TGGTGAATTT
TTCGCGCTGG TAAAGGATGC CCTCGCGGCG CGCGAACAGC TCGCTGGGGT CAGCAAGGGT
GCCTACACCA GCTTGTTCGG TGCCAAAGCA TGGGACAGCC CTGAGGCTGT AGAGAGCCTC
AGTCTGGCGG GGACCAGCGA CTACGCCGTC GATATGCAGA TCGAGAGCAT CTACGGGGTG
AAGGTGCCGC GTATCAAGAT TCCCGAGCGC CAGGCCGCTG CCGCCTTCAG CCCGATCAAC
GTCGGCGCCC GGACCATTCA GGCCGCGACC GATTTCGGGA CCGTTCTGGA AGCCATTGTG
CGCGTGGCCG CGACCGAGAC GAAGCTGCGC CGCATTGGTG AGGAAATCAA GAAGACCAGT
CGGCGCGTGA ACGCGCTGGA ACAGGTCGTG ATCCCCGGCA TCCGCGACGA CATCCGTTTC
ATTCGCGGCG TGCTCGACCA GCGCGAGCGC GAAGAGAGCT TCCGCCTGAA GAAGATCAAG
GCGAAACTCG AACGCGAGAA GAACAAGGAA AACGCCCAAG CCGGGCAGCA TGGCAGCGCC
GCTGACTGA
 
Protein sequence
MAGQISPTRS ALLASKASLK TATSGADLLK RKRDALIGEF FALVKDALAA REQLAGVSKG 
AYTSLFGAKA WDSPEAVESL SLAGTSDYAV DMQIESIYGV KVPRIKIPER QAAAAFSPIN
VGARTIQAAT DFGTVLEAIV RVAATETKLR RIGEEIKKTS RRVNALEQVV IPGIRDDIRF
IRGVLDQRER EESFRLKKIK AKLEREKNKE NAQAGQHGSA AD