Gene Dgeo_2032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_2032 
Symbol 
ID4058378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp2140380 
End bp2141336 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content66% 
IMG OID641231071 
Productinner-membrane translocator 
Protein accessionYP_605495 
Protein GI94986131 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGTCC TTCCCCGCAC TGCCGCCCGC ACGGACCGCC AGCGGATGAC CCGCGCCGCC 
TGGCTGATTG GCCTGGGGAT CGTGCTGCTG ATCCTGCCGC GGCTGATCTA TCCGGTACTG
GCGCTGGACA TCCTGGCGTG GGGCCTTTTT GCCGTTGCCT TTGACCTGCT GTTTGGCTTC
AGCGGTCTGC TGAGTTTCGG GCACGCGGCC TTCTGGGGCA CGAGCGCCTA CGTAACGGCC
TTTCTGCTGG GACACGGGCA GAGCGTCCCG GTGGCGCTGC TGGGGGGCAC GGGATCGGCG
CTGCTGATCG CCCTCCCCAT CGGCTTTCTG AGCGTGCGCT CGATCGGCAT CTACTTCTCC
ATGATCACGC TGGCCTTCGC CCAGATGCTC TCGTTCGTGG CGCTGCAGTG GACCGATGTG
ACGGGCGGCG AGAATGGGTT GCAGGGCCTA GCGCGGCCCG GCTTCCTGGG CCTCGACTTC
AGTGACGCCA CCACCCGCTA CTACTTCTGC CTGGTGCTGT TTGCGCTAGG CTTTTATGTC
GCCTATCGCA CGGTTCGCAG TCCCTTCGGG CAGGCGCTTC AGGCGGTGCG CGACAACGAG
CAAAGGGCGC AGAGCATCGG TTATAACCCC CAGCGCTTCA AGTTCACGGC CTTCCTGATC
AGCGCGACGC TTGCCGGGCT GGCGGGAAGC ATGTTCACCT TCGGACACGG CGTGGTGAGC
CTCGACGTGC TGAACTGGCG CACCTCCGGC GAGGTCGTGA TGATGACGCT GCTGGGCGGC
ACCACCACCC TCTTCGGCCC AGTGATTGGC GCGGGCCTGG TGCTGTTGCT GCGCGACGTG
CTCACCACCG CGAACCTGCC GGTCGGCATC GTGACCGGCC TGGTCTTTGT GCTGGTGGTG
CTGTTCTTCC GCCGCGGCGT GGTGGGCACC TTGCAGCACT GGCTGAGGCG CAGATAA
 
Protein sequence
MTVLPRTAAR TDRQRMTRAA WLIGLGIVLL ILPRLIYPVL ALDILAWGLF AVAFDLLFGF 
SGLLSFGHAA FWGTSAYVTA FLLGHGQSVP VALLGGTGSA LLIALPIGFL SVRSIGIYFS
MITLAFAQML SFVALQWTDV TGGENGLQGL ARPGFLGLDF SDATTRYYFC LVLFALGFYV
AYRTVRSPFG QALQAVRDNE QRAQSIGYNP QRFKFTAFLI SATLAGLAGS MFTFGHGVVS
LDVLNWRTSG EVVMMTLLGG TTTLFGPVIG AGLVLLLRDV LTTANLPVGI VTGLVFVLVV
LFFRRGVVGT LQHWLRRR