| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2030 |
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| Symbol | |
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| ID | 4058376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | + |
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| Start bp | 2138189 |
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| End bp | 2139412 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641231069 |
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| Product | LivK, ABC-type branched-chain amino acid transport systems, periplasmic component |
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| Protein accession | YP_605493 |
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| Protein GI | 94986129 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.438312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAGC AAACCCTGAC CGCCCTCGTC TCCACCGCCG CCCTCGCCGC TATGACGGTC
GCGCTCGCAC AGAGCCTGAA ACTCTCGGAC AACGTGGTGC GCATCGGCGT GCTGACCGAT
CTTTCCGGCG TGTACTCCGA ACTCTCGGGG CAGGGCAGCG TGAAGGCCGC ACAGATGGCC
GCTGCCGATT TCATGGCGAT GAACCCGTCC TTCCGGGGCA AGGTGCAGGT CATCGGCGTG
GACCACCAGA ACAAGGCCGA TGTGGCGAGC AACAAGGCCG CTGAGATGAT CGACCGCCAG
AAGGTGGACG TGCTGATGGA CCTACCCACC TCCAGCGCGG CGCTGGCCGC CTCGGAAGTG
GCGCGGCAGA AGAAGGTGCC CGTGATGGTC GTGACGGGCG GCACCACGGC CCTCACCAAC
GAGAAATGCA ACAAGTACAC CTTCCACTAC GCCTACGACA ACTACATGCT GGCAAACGGC
ACCGGAACGG CCGTGACCAA GCGCGGCGGC AACAGCTGGT ACATCATTTA TCCCAACTAC
GCCTTCGGCC AGGACCTCAA CCGGCAGATG ACGGCGGCCA TCCAGGAGAA CGGCGGCAAA
CTCGTCGCGC CGAGTGACGC CACCCCCTTC CCCAACACCG ACTTTTCCTC CTACCTGCTC
AAGGCGCAGG GCCTCAAGCC CAAGGTCTTC GGCACCATGC AGGCGGGCGC CGACCTGGTG
AATGTGGTCA AGCAGTACAA CGAGTTCGGG CTGCGCCAAC AGGGGATCGG CTTGGGGATC
GGTCTGCTGT TCGAGACGGA CGTGGCCGCC CTCGGGCAAG ACGCCTTCGC AGGCGCTCTG
GCGACCGTTC CGTGGTACTG GAACATGGAC CAGCGCGCAC GCGACTGGGC CGCGAAGTTC
GAGAAAGCTT TCGGCAAGAA ACCGACCTGG GCACAGGCCG GCGTCTACTC CGCCACCATG
ACCTATCTCC AGGCGGTCGC CCGCGCCAAA TCCGATGACG GCGACGCGGT GGTGAAGGCC
CTGGAAGGCC ACCGCTTCAG CGACTTCTTC GCCCGCAACG CCTATGTGCG CCCGCAGGAT
CACCGGGTGA TGCTCGACGT GTACACCGTG CAGGTCAAAC CCAAGGCCCA GGCCAAGGAG
AACGGCGACT ATTTCAACAA GGTCGCCACC ATTCCCGCCG CACGTGCCTT TATGCCGCTC
TCCGAGAGCA AGTGCCGGAT GTGA
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| Protein sequence | MQKQTLTALV STAALAAMTV ALAQSLKLSD NVVRIGVLTD LSGVYSELSG QGSVKAAQMA
AADFMAMNPS FRGKVQVIGV DHQNKADVAS NKAAEMIDRQ KVDVLMDLPT SSAALAASEV
ARQKKVPVMV VTGGTTALTN EKCNKYTFHY AYDNYMLANG TGTAVTKRGG NSWYIIYPNY
AFGQDLNRQM TAAIQENGGK LVAPSDATPF PNTDFSSYLL KAQGLKPKVF GTMQAGADLV
NVVKQYNEFG LRQQGIGLGI GLLFETDVAA LGQDAFAGAL ATVPWYWNMD QRARDWAAKF
EKAFGKKPTW AQAGVYSATM TYLQAVARAK SDDGDAVVKA LEGHRFSDFF ARNAYVRPQD
HRVMLDVYTV QVKPKAQAKE NGDYFNKVAT IPAARAFMPL SESKCRM
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