Gene Dgeo_1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1945 
Symbol 
ID4057479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp2047469 
End bp2047948 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content64% 
IMG OID641230977 
Productpeptidylprolyl isomerase, FKBP-type 
Protein accessionYP_605408 
Protein GI94986044 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00746376 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.69373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCA CCCAGGACAA GGTCGTCGAA CTCGATTACG TGCTCAAGGT GGACGGCGAG 
GTCGTAGACC GCAGCGAGCC GGGCGATCCG CTGGTCTATC TGCATGGCCA CAGCAACATT
ATCCCGGGCC TGGAACGCGC CCTGGAGGGA AAAAAGGCCG GTGACAGCCT GCACGTGACT
GTCCAGCCCG AAGAAGGCTA CGGCGAGCGC GACGAGGACA ACGTCGAAAC CCTAGACCGC
AGCGACTTCG ACGACGAGGT GGAGGTGGGC GCCACCTACT ACGCCCAGGC CGAGGACGGC
AGCGTGCTGC CCTTCACCGT GATCGGCGTC GAGGGGGACC AGGTGCAGGT GGACTTCAAC
CCTCCGCTGG CCGGGCAAGT GCTCAACTTC GATGTAACCG TCAGAAACGT CCGTGACGCC
ACGCCCGAAG AGCTTGAACA CGGCCACGCC CACGCAGGCG GCGTGCACGA GCACGAGTAA
 
Protein sequence
MNITQDKVVE LDYVLKVDGE VVDRSEPGDP LVYLHGHSNI IPGLERALEG KKAGDSLHVT 
VQPEEGYGER DEDNVETLDR SDFDDEVEVG ATYYAQAEDG SVLPFTVIGV EGDQVQVDFN
PPLAGQVLNF DVTVRNVRDA TPEELEHGHA HAGGVHEHE