Gene Dgeo_1927 details

Gene Information

• Locus tag: Dgeo_1927
• Symbol: acpS
• ID: 4057675
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Deinococcus geothermalis DSM 11300
• Kingdom: Bacteria
• Replicon accession: NC_008025
• Strand: +
• Start bp: 2030913
• End bp: 2031317
• Gene Length: 405 bp
• Protein Length: 134 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 641230959
• Product: 4'-phosphopantetheinyl transferase
• Protein accession: YP_605391
• Protein GI: 94986027
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0736] Phosphopantetheinyl transferase (holo-ACP synthase)
• TIGRFAM ID: [TIGR00516] holo-[acyl-carrier-protein] synthase; [TIGR00556] phosphopantethiene--protein transferase domain

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.125964
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.348533
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGGGCGA TGATCGTCGC CATCGGACAC GACCTGATCG AGATCGAGCG CATCCGGGGC 
CTGCTCGCGC GGGAGGGGCG CCGGGCGGAG AAGCTCTTCG CACCGCCCGA ACTCGCCTAC 
TGCGCCCGGT TGGCCGATCC CGCCCCCAGC CTGGCCGCCC GCTTTGCCGC CAAAGAAGCC 
TTTCAGAAGG TCTGGCCCCG CCCGCACGGC TGGCGCGACG TGTGGGTCGA GCGCGAGCGC 
ACACCGAACG GCCCCTTTCC CTTTGCGCCC CCGGTGCTGG GCTTTGCGCC CGAGATTGCG 
GCGGAGTTAG AGGCGCGGGG CTGGGTCGCC CACCTGACGC TGACGCACAC GAAGGAGCAC 
GCCTCCGCGG TTGTCGTGCT GGAGGCACGC GGCCAGACCC TCTGA 

 

Protein sequence

MGAMIVAIGH DLIEIERIRG LLAREGRRAE KLFAPPELAY CARLADPAPS LAARFAAKEA 
FQKVWPRPHG WRDVWVERER TPNGPFPFAP PVLGFAPEIA AELEARGWVA HLTLTHTKEH 
ASAVVVLEAR GQTL