Gene Dgeo_1915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1915 
Symbol 
ID4057663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp2019870 
End bp2020385 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content68% 
IMG OID641230946 
Productphenylacetate-CoA oxygenase, PaaJ subunit 
Protein accessionYP_605379 
Protein GI94986015 
COG category[R] General function prediction only 
COG ID[COG2151] Predicted metal-sulfur cluster biosynthetic enzyme 
TIGRFAM ID[TIGR02159] phenylacetate-CoA oxygenase, PaaJ subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.844425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.11814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGGT CTGGTAAGCC CCTGACTGCC GTTCACGTTA CCCCGGAGCA GGTTTGGGCC 
ACTCTCGCTG CCGTCCCCGA CCCCGAAATC CCTGTGGTCT CAGTGACCGA CATGGGGATG
GTGCGGGACG TGACGGTGGA CGGCGGGCGC GTGACGGTCA CCTTTACCCC CACCTTCTCC
GGCTGCCCGG CGCTGCATGT CATCCGCGAC TCCATCGGGA AGGCGGTGCG CGCCCTGGGC
GTGGAGGACG TGGAGGTCCG CAGCACCCTC ACGCCCCCCT GGACGACCGA CTGGATCAAG
GCAGACGCCC GCGAGAGGTT GCGTCAGTAC GGCATCGCGC CGCCCGCTCC CGCCGGGGAC
ACCCCTCTCA TCACCCTAGA CCCCGAACCC ACCCGCTGTC CTCGCTGTGG GTCCCTGAAC
GTGCGGATGA CGGCCAGCTT CGGCCCGACG CTGTGCAAGC GGCTGTACGT GTGCGAAAGC
TGCCGGGAGC CGTTTGAGGG GTTTAAGAGT GTGTGA
 
Protein sequence
MPRSGKPLTA VHVTPEQVWA TLAAVPDPEI PVVSVTDMGM VRDVTVDGGR VTVTFTPTFS 
GCPALHVIRD SIGKAVRALG VEDVEVRSTL TPPWTTDWIK ADARERLRQY GIAPPAPAGD
TPLITLDPEP TRCPRCGSLN VRMTASFGPT LCKRLYVCES CREPFEGFKS V